RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TMEM225Q6GV28 225 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 DPY19L2P1Q6NXN4 242 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 SERPINA11Q86U17 422 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 ZNF280BQ86YH2 543 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 OR7G1Q8NGA0 311 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 OR5AK2Q8NH90 309 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 THAP7Q9BT49 309 aaPredicted RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 OR51E2Q9H255 320 aa12.42□□□□□ -0.42
RNF43-208ENST00000584437 UBE2J1Q9Y385 318 aaPredicted RBP12.42□□□□□ -0.42
RNF43-208ENST00000584437 TRAV18A0A075B6X5 111 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 VSTM5A8MXK1 200 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 HRGP04196 525 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 LAMP1P11279 417 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 TAP2Q03519 686 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 CATSPEREQ5SY80 951 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 RAB7BQ96AH8 199 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 FAM46AQ96IP4 442 aaKnown RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 ZNF778Q96MU6 729 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ZNF300Q96RE9 604 aaPredicted RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 MVB12BQ9H7P6 319 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 MTHFD2LQ9H903 347 aaPredicted RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 IRS2Q9Y4H2 1338 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 UGDHO60701 494 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ADORA3P0DMS8 318 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 PTPN6P29350 595 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 MAGEA3P43357 314 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 HTR6P50406 440 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 CCINQ13939 588 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ATAD3CQ5T2N8 411 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 SLC18B1Q6NT16 456 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 TMEM107Q6UX40 140 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 SHISA4Q96DD7 197 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 C2orf74A8MZ97 194 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 SORBS2O94875 1100 aaKnown RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 ATE1O95260 518 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ADH1BP00325 375 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 CRHBPP24387 322 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 NKX6-1P78426 367 aaPredicted RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 EMX1Q04741 257 aaPredicted RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 PLP2Q04941 152 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 RAB40BQ12829 278 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 LRP8Q14114 963 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 PPA1Q15181 289 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 AKR1C8PQ5T2L2 129 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 SORCS1Q8WY21 1168 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 NT5C3BQ969T7 300 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 PGAM5Q96HS1 289 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 F2RL3Q96RI0 385 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 FANCFQ9NPI8 374 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 NDRG2Q9UN36 371 aaKnown RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 POLR1CO15160 346 aaPredicted RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 GPR37L1O60883 481 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ALDOBP05062 364 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 PGCP20142 388 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 DLSTP36957 453 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ALDH3B1P43353 468 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 RPS26P62854 115 aaKnown RBP12.41□□□□□ -0.42
RNF43-208ENST00000584437 ERVK-25P63136 954 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 NAXEQ8NCW5 288 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 POC1BQ8TC44 478 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 C16orf78Q8WTQ4 265 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 FAM83CQ9BQN1 747 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ALG8Q9BVK2 526 aa12.41□□□□□ -0.42
RNF43-208ENST00000584437 ATG12O94817 140 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 CAPNS1P04632 268 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SYPP08247 313 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 NUDT7P0C024 238 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RPS2P15880 293 aaKnown RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 MAGEA6P43360 314 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 FGL2Q14314 439 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 GALEQ14376 348 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 C2orf27AQ580R0 203 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 PRRT3Q5FWE3 981 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 P4HA3Q7Z4N8 544 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 TMEM150AQ86TG1 271 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 BMFQ96LC9 184 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 TMEM68Q96MH6 324 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 THSD1Q9NS62 852 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 INSL5Q9Y5Q6 135 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RIMS1Q86UR5 1692 aaKnown RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 DLX5P56178 289 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 PITX1P78337 314 aaPredicted RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 KCNJ8Q15842 424 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 ZNF691Q5VV52 312 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 PPP2R2DQ66LE6 453 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 OR4C11Q6IEV9 310 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 KIAA1211LQ6NV74 962 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 C1orf94Q6P1W5 598 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 RANBP10Q6VN20 620 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 TMEM185AQ8NFB2 350 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SCAMP4Q969E2 229 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 GIMAP5Q96F15 307 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 SLC41A3Q96GZ6 507 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 OR2M2Q96R28 347 aa12.4□□□□□ -0.42
RNF43-208ENST00000584437 WDR6Q9NNW5 1121 aaKnown RBP12.4□□□□□ -0.42
RNF43-208ENST00000584437 COQ3Q9NZJ6 369 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms