RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 B3GALT2O43825 422 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 FAM155BO75949 473 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SCELO95171 688 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 RAF1P04049 648 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 IFNA16P05015 189 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 INHBBP09529 407 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CT62P0C5K7 136 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CTAGE8P0CG41 777 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ATP5A1P25705 553 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 LOXP28300 417 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CCKARP32238 428 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 PTGDSP41222 190 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 RPL21P46778 160 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ASCL1P50553 236 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 HERVK_113P63132 956 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ERVK-8P63133 956 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CDKL1Q00532 357 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SLC10A1Q14973 349 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 EBPQ15125 230 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 MPEG1Q2M385 716 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 EIPR1Q53HC9 387 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SPANXN3Q5MJ09 141 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ESPNLQ6ZVH7 1005 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 GPSM1Q86YR5 675 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CTAGE4Q8IX94 777 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 FBXW8Q8N3Y1 598 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ACOT4Q8N9L9 421 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 MORN4Q8NDC4 146 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CHDHQ8NE62 594 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 OR8K3Q8NH51 312 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ZNF473Q8WTR7 871 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SLC44A1Q8WWI5 657 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CCT6BQ92526 530 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SPACA9Q96E40 222 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 WDR34Q96EX3 536 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SENP5Q96HI0 755 aaPredicted RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 C18orf12Q96KH6 178 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 SERINC2Q96SA4 455 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 TIMP4Q99727 224 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ERVK-6Q9BXR3 956 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 REXO4Q9GZR2 422 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 DDX47Q9H0S4 455 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 CLK4Q9HAZ1 481 aaKnown RBP7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 C14orf119Q9NWQ9 140 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 NTMQ9P121 344 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ACAD8Q9UKU7 415 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 ERVK-19Q9WJR5 959 aa7.17□□□□□ -1.26
PPP4R1-225ENST00000583438 GLOD5A6NK44 160 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 PLPP1O14494 284 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 PHGDHO43175 533 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 TMPRSS11DO60235 418 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HCN1O60741 890 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 NME6O75414 186 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 EEDO75530 441 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 CYP7B1O75881 506 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 EPPINO95925 133 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HEXAP06865 529 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HIST1H2AGP0C0S8 130 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 CLEC2LP0C7M8 214 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HIST1H2ADP20671 130 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 DNASE1P24855 282 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 APEX1P27695 318 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 GGT5P36269 586 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 STT3AP46977 705 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 DGKQP52824 942 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 MANFP55145 182 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 MTTPP55157 894 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 SLC37A1P57057 533 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 FBXW4P57775 412 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 STXBP1P61764 594 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 DCAF7P61962 342 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 DUSP2Q05923 314 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 FAPQ12884 760 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 TGFBIQ15582 683 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 NTRK2Q16620 822 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 UBAP2Q5T6F2 1119 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 WLSQ5T9L3 541 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 FAM45BPQ6NSW5 357 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 RGS9BPQ6ZS82 235 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 PRR22Q8IZ63 422 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 TMEM132CQ8N3T6 1108 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 NUDT10Q8NFP7 164 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 OR14A16Q8NHC5 309 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 PPP1R14CQ8TAE6 165 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 NUBPLQ8TB37 319 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 FAM45AQ8TCE6 357 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 FAM222BQ8WU58 562 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 ATL1Q8WXF7 558 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 NUDT11Q96G61 164 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 WDYHV1Q96HA8 205 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HIST1H2AHQ96KK5 128 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 MARK4Q96L34 752 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 SGCZQ96LD1 299 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 RUNDC3BQ96NL0 473 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 HIST1H2AJQ99878 128 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 CCDC77Q9BR77 488 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 H2AFJQ9BTM1 129 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 UGT2B28Q9BY64 529 aa7.16□□□□□ -1.26
PPP4R1-225ENST00000583438 WWTR1Q9GZV5 400 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms