RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 MYL2P10916 166 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 DRD2P14416 443 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 DRD5P21918 477 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 TIA1P31483 386 aaKnown RBP eCLIP18.69■□□□□ 0.58
SHMT1-209ENST00000582653 PTGDSP41222 190 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 PPICP45877 212 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 PLCXD2Q0VAA5 305 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 EIPR1Q53HC9 387 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 SPIN4Q56A73 249 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 NHSL2Q5HYW2 709 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 SPDYAQ5MJ70 313 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 WIPI1Q5MNZ9 446 aaPredicted RBP18.69■□□□□ 0.58
SHMT1-209ENST00000582653 TMEM81Q6P7N7 255 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 ANGPTL8Q6UXH0 198 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 ZYG11AQ6WRX3 759 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 NUP54Q7Z3B4 507 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 OR9A2Q8NGT5 310 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 C11orf24Q96F05 449 aaPredicted RBP18.69■□□□□ 0.58
SHMT1-209ENST00000582653 TMEM41AQ96HV5 264 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 PRDM14Q9GZV8 571 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 GALNT9Q9HCQ5 603 aa18.69■□□□□ 0.58
SHMT1-209ENST00000582653 SMIM23A6NLE4 172 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 ICOSLGO75144 302 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 GLRA3O75311 464 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 CTAG2O75638 210 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 PROCP04070 461 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 CD1EP15812 388 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 PTPN6P29350 595 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 DNAJA1P31689 397 aaKnown RBP18.68■□□□□ 0.58
SHMT1-209ENST00000582653 KIR2DL3P43628 341 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 NAGLUP54802 743 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 PRSS53Q2L4Q9 553 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 ACSF3Q4G176 576 aaPredicted RBP18.68■□□□□ 0.58
SHMT1-209ENST00000582653 TIGD3Q6B0B8 471 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 LACC1Q8IV20 430 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 TNIP2Q8NFZ5 429 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 OR1J4Q8NGS1 313 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 UBLCP1Q8WVY7 318 aaPredicted RBP18.68■□□□□ 0.58
SHMT1-209ENST00000582653 PRODH2Q9UF12 536 aa18.68■□□□□ 0.58
SHMT1-209ENST00000582653 GPR55Q9Y2T6 319 aaPredicted RBP18.68■□□□□ 0.58
SHMT1-209ENST00000582653 ANKRD17O75179 2603 aaKnown RBP18.68■□□□□ 0.58
SHMT1-209ENST00000582653 DVL2O14641 736 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 ACOX3O15254 700 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 IL2RAP01589 272 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 ANXA4P09525 319 aaPredicted RBP18.67■□□□□ 0.58
SHMT1-209ENST00000582653 DCAF7P61962 342 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 SNTB1Q13884 538 aaKnown RBP18.67■□□□□ 0.58
SHMT1-209ENST00000582653 HEPACAMQ14CZ8 416 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 GALNT18Q6P9A2 607 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 POMZP3Q6PJE2 187 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 YRDCQ86U90 279 aaKnown RBP18.67■□□□□ 0.58
SHMT1-209ENST00000582653 NAXEQ8NCW5 288 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 CDC26Q8NHZ8 85 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 ZNF675Q8TD23 568 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 TMBIM1Q969X1 311 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 CCDC126Q96EE4 140 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 LRRC46Q96FV0 321 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 OSBPL11Q9BXB4 747 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 SHCBP1LQ9BZQ2 653 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 TNFRSF12AQ9NP84 129 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 SLC35C2Q9NQQ7 365 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 DNAJB12Q9NXW2 375 aaKnown RBP18.67■□□□□ 0.58
SHMT1-209ENST00000582653 EXPH5Q8NEV8 1989 aa18.67■□□□□ 0.58
SHMT1-209ENST00000582653 ARHGAP21Q5T5U3 1957 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 SERTM1A2A2V5 107 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FAM221AA4D161 298 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 CCDC151A5D8V7 595 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FRG2CA6NGY1 282 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 PLIN3O60664 434 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 REM1O75628 298 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FREM3P0C091 2139 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 BMP7P18075 431 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 BMP5P22003 454 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 CORO7P57737 925 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 C2orf80Q0P641 193 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 SNTA1Q13424 505 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FBXL19-AS1Q494R0 122 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 DCST1Q5T197 706 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 NSUN5P2Q63ZY6 315 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 SLC30A6Q6NXT4 461 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 ZZZ3Q8IYH5 903 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 RELL2Q8NC24 303 aaPredicted RBP18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FAM83FQ8NEG4 500 aaPredicted RBP18.66■□□□□ 0.58
SHMT1-209ENST00000582653 TRIM44Q96DX7 344 aaPredicted RBP18.66■□□□□ 0.58
SHMT1-209ENST00000582653 WDYHV1Q96HA8 205 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 UGT2B28Q9BY64 529 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 SERHLQ9NQF3 203 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 KLRF1Q9NZS2 232 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 FOXD3Q9UJU5 478 aaPredicted RBP18.66■□□□□ 0.58
SHMT1-209ENST00000582653 MAPRE3Q9UPY8 281 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 CAMK2AQ9UQM7 478 aa18.66■□□□□ 0.58
SHMT1-209ENST00000582653 CD8B2A6NJW9 211 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 TO15178 435 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 CT45A8P0DMV1 189 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 CT45A9P0DMV2 189 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 UQCRC1P31930 480 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 ASCL1P50553 236 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 ART1P52961 327 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 IST1P53990 364 aa18.65■□□□□ 0.58
SHMT1-209ENST00000582653 CT45A2Q5DJT8 189 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms