RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TRMT12Q53H54 448 aaKnown RBP9.64□□□□□ -0.87
RFFL-209ENST00000581265 SGO1Q5FBB7 561 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 EEF1A1P5Q5VTE0 462 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 FBXW10Q5XX13 1052 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 ENPP6Q6UWR7 440 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 ZNF572Q7Z3I7 529 aaPredicted RBP9.64□□□□□ -0.87
RFFL-209ENST00000581265 RELL1Q8IUW5 271 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 TRIM42Q8IWZ5 723 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 SIMC1Q8NDZ2 872 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 OR4F6Q8NGB9 312 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 SLC44A1Q8WWI5 657 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 WNT2BQ93097 391 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 OMA1Q96E52 524 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 ARSGQ96EG1 525 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 ZNF681Q96N22 645 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 TUBA1CQ9BQE3 449 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 LRRC1Q9BTT6 524 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 G6PC3Q9BUM1 346 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 SFXN3Q9BWM7 321 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 ITPAQ9BY32 194 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 BRINP2Q9C0B6 783 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 OR2B2Q9GZK3 357 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 BRF2Q9HAW0 419 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 GALNT9Q9HCQ5 603 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 SERHLQ9NQF3 203 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 FARSBQ9NSD9 589 aaKnown RBP9.64□□□□□ -0.87
RFFL-209ENST00000581265 NMRK1Q9NWW6 199 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 PRODH2Q9UF12 536 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 BCAP29Q9UHQ4 241 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 SLC12A4Q9UP95 1085 aa9.64□□□□□ -0.87
RFFL-209ENST00000581265 GPR55Q9Y2T6 319 aaPredicted RBP9.64□□□□□ -0.87
RFFL-209ENST00000581265 MRPS18CQ9Y3D5 142 aaKnown RBP9.64□□□□□ -0.87
RFFL-209ENST00000581265 ESYT3A0FGR9 886 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 OR6C70A6NIJ9 312 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 CLCA1A8K7I4 914 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 A8MXE2 369 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PPP6CO00743 305 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ABCB7O75027 752 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SMIM24O75264 130 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ERN1O75460 977 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 OTCP00480 354 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PDYNP01213 254 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 HRGP04196 525 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 RPS17P08708 135 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 CHMP24386 653 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 CASQ1P31415 396 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PCYT1AP49585 367 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 GFRA1P56159 465 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ETF1P62495 437 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 TRA2BP62995 288 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 HMGCS1Q01581 520 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SLC7A5Q01650 507 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 DUSP2Q05923 314 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PLCXD2Q0VAA5 305 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 GAB1Q13480 694 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 NNATQ16517 81 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 TSNAXIP1Q2TAA8 658 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SCIMPQ6UWF3 145 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PLCZ1Q86YW0 608 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 TMEM151AQ8N4L1 468 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 WFDC11Q8NEX6 87 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ADCY4Q8NFM4 1077 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 OR52R1Q8NGF1 315 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 OR14L1PQ8NHC6 308 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SELENOMQ8WWX9 145 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SMPDL3BQ92485 455 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 TMCO6Q96DC7 493 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ERP27Q96DN0 273 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 CNRIP1Q96F85 164 aaPredicted RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 MRPL57Q9BQC6 102 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 YIPF4Q9BSR8 244 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 FAIM2Q9BWQ8 316 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 RBM24Q9BX46 236 aaKnown RBP9.63□□□□□ -0.87
RFFL-209ENST00000581265 OSBPL11Q9BXB4 747 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 C1QTNF3Q9BXJ4 246 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ACBD3Q9H3P7 528 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 NEUROD4Q9HD90 331 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 TAS2R10Q9NYW0 307 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 NINJ2Q9NZG7 142 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 KLRF1Q9NZS2 232 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 XPR1Q9UBH6 696 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 SNX6Q9UNH7 406 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 MAPRE3Q9UPY8 281 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PLLPQ9Y342 182 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 ZNF780BQ9Y6R6 833 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 EXPH5Q8NEV8 1989 aa9.63□□□□□ -0.87
RFFL-209ENST00000581265 PRAMEF25A6NGN4 478 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 FRG2CA6NGY1 282 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 H0Y3Z8 333 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 REM1O75628 298 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 BCAS2O75934 225 aaPredicted RBP9.62□□□□□ -0.87
RFFL-209ENST00000581265 LY6G6DO95868 133 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 INHBAP08476 426 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 SBK3P0C264 359 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 CT45A8P0DMV1 189 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 CT45A9P0DMV2 189 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 CD53P19397 219 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 CNTFP26441 200 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 SRD5A2P31213 254 aa9.62□□□□□ -0.87
RFFL-209ENST00000581265 SERPINB9P50453 376 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms