RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 FCHO1O14526 889 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 ITGA10O75578 1167 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 ANXA4P09525 319 aaPredicted RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 FAM58BPP0C7Q3 252 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 CD53P19397 219 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 MAOAP21397 527 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 JAK1P23458 1154 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 MAPK1P28482 360 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 HNRNPH2P55795 449 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 RAE1P78406 368 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 NKX6-1P78426 367 aaPredicted RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 MRM1Q6IN84 353 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 SEM1Q6ZVN7 128 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 MAVSQ7Z434 540 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 LRRC34Q8IZ02 419 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 VWA5B2Q8N398 1253 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 FNDC5Q8NAU1 212 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 OR2M7Q8NG81 312 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 CDC26Q8NHZ8 85 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 TBC1D20Q96BZ9 403 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 THOC1Q96FV9 657 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 COX4I2Q96KJ9 171 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 PTCHD1Q96NR3 888 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 CSF3RQ99062 836 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 LIN28AQ9H9Z2 209 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 NPHS2Q9NP85 383 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 SIRT5Q9NXA8 310 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 MRPS33Q9Y291 106 aaKnown RBP17.82■□□□□ 0.44
LIMD2-209ENST00000580222 TMED5Q9Y3A6 229 aa17.82■□□□□ 0.44
LIMD2-209ENST00000580222 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 A0A1W2PPR1 153 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 FIGNL2A6NMB9 653 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 INAFM1C9JVW0 142 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 BCKDKO14874 412 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 PRKNO60260 465 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 GUCY1B2O75343 617 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 GLSO94925 669 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 IGHG3P01860 377 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 TROVE2P10155 538 aaKnown RBP eCLIP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 IL10P22301 178 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 EPHA3P29320 983 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 BUD31P41223 144 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 AQP5P55064 265 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 GNGT1P63211 74 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 TNFRSF17Q02223 184 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 ZNF763Q0D2J5 394 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 MAD2L1Q13257 205 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 SLC9B1Q4ZJI4 515 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 RFTN2Q52LD8 501 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 C6orf136Q5SQH8 315 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 NXNQ6DKJ4 435 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 NOXRED1Q6NXP6 359 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 GALNT18Q6P9A2 607 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 PAOXQ6QHF9 649 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 TRILQ7L0X0 811 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 GPR180Q86V85 440 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 TMEM156Q8N614 296 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 C11orf24Q96F05 449 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 C1orf50Q9BV19 199 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 TTTY12Q9BZ98 90 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 WDR55Q9H6Y2 383 aaPredicted RBP17.81■□□□□ 0.44
LIMD2-209ENST00000580222 AKTIPQ9H8T0 292 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 NEUROD4Q9HD90 331 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 NECTIN3Q9NQS3 549 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 MS4A12Q9NXJ0 267 aa17.81■□□□□ 0.44
LIMD2-209ENST00000580222 A0A1B0GVC2 190 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 OR14I1A6ND48 311 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 H7C1Q1 480 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 TGDSO95455 350 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 NR2F6P10588 404 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 ALOX15P16050 662 aaPredicted RBP17.8■□□□□ 0.44
LIMD2-209ENST00000580222 LBPP18428 481 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 MAGEA5P43359 124 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 DCAF7P61962 342 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 TRA2BP62995 288 aaKnown RBP17.8■□□□□ 0.44
LIMD2-209ENST00000580222 PLGLB1Q02325 96 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 KIAA0040Q15053 153 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 C1orf185Q5T7R7 199 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 CXorf67Q86X51 503 aaPredicted RBP17.8■□□□□ 0.44
LIMD2-209ENST00000580222 TMEM251Q8N6I4 163 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 PSD4Q8NDX1 1056 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 CHMP6Q96FZ7 201 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 FCRL1Q96LA6 429 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 WDR41Q9HAD4 459 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 TIMMDC1Q9NPL8 285 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 TEX10Q9NXF1 929 aaPredicted RBP17.8■□□□□ 0.44
LIMD2-209ENST00000580222 DLGAP4Q9Y2H0 992 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 ATG4BQ9Y4P1 393 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 ASB4Q9Y574 426 aa17.8■□□□□ 0.44
LIMD2-209ENST00000580222 IGKV3D-11A0A0A0MRZ8 115 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 TCRBV16S1A1N1A0A5B0 115 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 KDM4EB2RXH2 506 aaPredicted RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 ZNF195O14628 629 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 AIFM1O95831 613 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 IL3P08700 152 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 TACR1P25103 407 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 TLX1P31314 330 aaPredicted RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 LSP1P33241 339 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 GSTM5P46439 218 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 ERVK-8P63133 956 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms