RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ZNF764Q96H86 408 aaPredicted RBP17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 BTBD9Q96Q07 612 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 NUF2Q9BZD4 464 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 AKTIPQ9H8T0 292 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 IL1RL2Q9HB29 575 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 CNIH4Q9P003 139 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 ATP6V1HQ9UI12 483 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 TINAGQ9UJW2 476 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 C19orf53Q9UNZ5 99 aaPredicted RBP17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF835Q9Y2P0 537 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 EXPH5Q8NEV8 1989 aa17.14■□□□□ 0.33
PPP4R1-215ENST00000580182 A0A087WV62 115 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 WIPF3A6NGB9 483 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 LRRC3CA6NJW4 275 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 ACOT7O00154 380 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 SCAMP2O15127 329 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 TO15178 435 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 ACOX3O15254 700 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 SNNO75324 88 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 SNUPNO95149 360 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 RFPL3SP0C7P2 107 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 G6PDP11413 515 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 PRPS2P11908 318 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 FRKP42685 505 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 TMED10P49755 219 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 CDK9P50750 372 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF155Q12901 538 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 BNC2Q6ZN30 1099 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 SLC22A16Q86VW1 577 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 SLC34A3Q8N130 599 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 OR2L13Q8N349 312 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 TMBIM1Q969X1 311 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 RELTQ969Z4 430 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 JSRP1Q96MG2 331 aaPredicted RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 PSMG3-AS1Q96PY0 264 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 NODALQ96S42 347 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 DOHHQ9BU89 302 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 ZDHHC11Q9H8X9 412 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 RYDENQ9NUL5 291 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 DDX18Q9NVP1 670 aaKnown RBP17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 TAS2R9Q9NYW1 312 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 LIPGQ9Y5X9 500 aa17.13■□□□□ 0.33
PPP4R1-215ENST00000580182 LRRK2Q5S007 2527 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 UGT2B11O75310 529 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 PSMG1O95456 288 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 LAMP1P11279 417 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 NAGAP17050 411 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 GPC1P35052 558 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 CASP3P42574 277 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 CA7P43166 264 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 MANFP55145 182 aaKnown RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 PSG6Q00889 435 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 EMX2Q04743 252 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 HDXQ7Z353 690 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 R3HCC1LQ7Z5L2 792 aaKnown RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 MTERF3Q96E29 417 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 ATP6V1G3Q96LB4 118 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 RILPQ96NA2 401 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 ANGPTL4Q9BY76 406 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 MANSC1Q9H8J5 431 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 ZFP64Q9NPA5 681 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 PLSCR2Q9NRY7 297 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 THAP1Q9NVV9 213 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 ARGLU1Q9NWB6 273 aaPredicted RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 EIF3LQ9Y262 564 aaKnown RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 NINQ8N4C6 2090 aa17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 ASH1LQ9NR48 2969 aaKnown RBP17.12■□□□□ 0.33
PPP4R1-215ENST00000580182 A0A1B0GUH1 482 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 ANKRD33BA6NCL7 494 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 CCL21O00585 134 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 COQ9O75208 318 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 TRIM3O75382 744 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 REM1O75628 298 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 SLITRK5O94991 958 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 KITP10721 976 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 ABOP16442 354 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 HPCAL1P37235 193 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 DIO3P55073 304 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 HYAL4Q2M3T9 481 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 Q6ZPB1 254 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 RGS9BPQ6ZS82 235 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 NUP54Q7Z3B4 507 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 FAM109AQ8N4B1 249 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 ZBED6CLQ96FA7 236 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 SECISBP2Q96T21 854 aaKnown RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 BOKQ9UMX3 212 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 NCKAP5O14513 1909 aa17.11■□□□□ 0.33
PPP4R1-215ENST00000580182 A1L4Q6 167 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 C2orf72A6NCS6 295 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 TSPAN2O60636 221 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ZG16O60844 167 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 PTGDSP41222 190 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 MAD2L1Q13257 205 aaPredicted RBP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 TBCELQ5QJ74 424 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 FNDC7Q5VTL7 733 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 ATG16L1Q676U5 607 aa17.1■□□□□ 0.33
PPP4R1-215ENST00000580182 C3P1Q6ZMU1 363 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms