RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MRPL1Q9BYD6 325 aaKnown RBP16.28■□□□□ 0.2
MKS1-209ENST00000580127 OR2B2Q9GZK3 357 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 ZNF226Q9NYT6 803 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 PACSIN3Q9UKS6 424 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 SNX6Q9UNH7 406 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 SLC12A4Q9UP95 1085 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 MAPRE3Q9UPY8 281 aa16.28■□□□□ 0.2
MKS1-209ENST00000580127 EXPH5Q8NEV8 1989 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 C2orf72A6NCS6 295 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 OR6C70A6NIJ9 312 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 STX16-NPEPL1H3BU86 382 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 OR7A17O14581 309 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 STX16O14662 325 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 OTCP00480 354 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 CD53P19397 219 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 SRD5A2P31213 254 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 EEFSECP57772 596 aaKnown RBP16.27■□□□□ 0.2
MKS1-209ENST00000580127 TRA2BP62995 288 aaKnown RBP16.27■□□□□ 0.2
MKS1-209ENST00000580127 FOXF2Q12947 444 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 EFR3AQ14156 821 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 POU4F3Q15319 338 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 NNATQ16517 81 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 DCST1Q5T197 706 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 FAM111BQ6SJ93 734 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 PLCZ1Q86YW0 608 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 SLC44A1Q8WWI5 657 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 KLHL29Q96CT2 875 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 ERP27Q96DN0 273 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 NODALQ96S42 347 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 KCNF1Q9H3M0 494 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 BRF2Q9HAW0 419 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 PFDN4Q9NQP4 134 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 NFU1Q9UMS0 254 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 DLGAP4Q9Y2H0 992 aa16.27■□□□□ 0.2
MKS1-209ENST00000580127 KIAA1549Q9HCM3 1950 aa16.27■□□□□ 0.19
MKS1-209ENST00000580127 HRNRQ86YZ3 2850 aaPredicted RBP16.27■□□□□ 0.19
MKS1-209ENST00000580127 A0A1W2PS29 197 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 FRG2CA6NGY1 282 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 A8MXE2 369 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 MSTNO14793 375 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 TO15178 435 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 SMPD2O60906 423 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ESRRBO95718 433 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 FPR1P21462 350 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 SLCO1A2P46721 670 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ALDH9A1P49189 494 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 PCYT1AP49585 367 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 EXOSC7Q15024 291 aaKnown RBP16.26■□□□□ 0.19
MKS1-209ENST00000580127 BCL2A1Q16548 175 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ERCC6LQ2NKX8 1250 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 COMMD6Q7Z4G1 85 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 MED12LQ86YW9 2145 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 WDSUB1Q8N9V3 476 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 OR52B6Q8NGF0 335 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 SFXN2Q96NB2 322 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 GPR78Q96P69 363 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 PIP5K1AQ99755 562 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ITPAQ9BY32 194 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 GALNT9Q9HCQ5 603 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 MAT2BQ9NZL9 334 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ZNF639Q9UID6 485 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 DKKL1Q9UK85 242 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 CES1P1Q9UKY3 287 aa16.26■□□□□ 0.19
MKS1-209ENST00000580127 ARID1AO14497 2285 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 UGT2B11O75310 529 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 COL6A2P12110 1019 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 CNTFP26441 200 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 HMGCS1Q01581 520 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 GUCY2DQ02846 1103 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 MGAT2Q10469 447 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 TSNAXIP1Q2TAA8 658 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 GGTA1PQ4G0N0 100 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 ADGRE4PQ86SQ3 457 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 LRRC75A-AS1Q8N1F1 130 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 OR52R1Q8NGF1 315 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 SELENOMQ8WWX9 145 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 TM4SF18Q96CE8 201 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 CTHRC1Q96CG8 243 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 SDHAF3Q9NRP4 125 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 GIMAP4Q9NUV9 329 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 DTX4Q9Y2E6 619 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
MKS1-209ENST00000580127 PLLPQ9Y342 182 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 MED12Q93074 2177 aa16.25■□□□□ 0.19
MKS1-209ENST00000580127 PLOD2O00469 737 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 SMNDC1O75940 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
MKS1-209ENST00000580127 PEPDP12955 493 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 IL12BP29460 328 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 CPOXP36551 454 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 STARP49675 285 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 GFRA1P56159 465 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 C2orf54Q08AI8 447 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 FGFBP1Q14512 234 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 TRMT12Q53H54 448 aaKnown RBP16.24■□□□□ 0.19
MKS1-209ENST00000580127 TECRLQ5HYJ1 363 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 Q71RC1 249 aaPredicted RBP16.24■□□□□ 0.19
MKS1-209ENST00000580127 GCNT2Q8N0V5 402 aa16.24■□□□□ 0.19
MKS1-209ENST00000580127 TMBIM1Q969X1 311 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms