RNA–Protein interactions for RNA: ENST00000579894.5

ACADVL-222, Transcript of acyl-CoA dehydrogenase very long chain, human

TSL 2

Gene ACADVL, Length 429 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACADVL-222	ENST00000579894	SLC17A7	Q9P2U7	560 aa		12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	ACAD8	Q9UKU7	415 aa		12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	EXO1	Q9UQ84	846 aa	Known RBP	12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	GPR55	Q9Y2T6	319 aa	Predicted RBP	12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	C15orf41	Q9Y2V0	281 aa		12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	MYO9A	B2RTY4	2548 aa		12.8	□□□□□ -0.36
ACADVL-222	ENST00000579894	LRBA	P50851	2863 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	APC	P25054	2843 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	FAM90A27P	A6NNH2	459 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	MYO1G	B0I1T2	1018 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	T	O15178	435 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	WDR1	O75083	606 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	UGT2B11	O75310	529 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	SPAG7	O75391	227 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	ERN1	O75460	977 aa	Known RBP	12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	BCAS2	O75934	225 aa	Predicted RBP	12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	PRPH2	P23942	346 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	ALDH3A1	P30838	453 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	CHRNB4	P30926	498 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	PTGER4	P35408	488 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	KIR3DL1	P43629	444 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	CDK9	P50750	372 aa	Known RBP	12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	CORO7	P57737	925 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	PMPCA	Q10713	525 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	C1orf185	Q5T7R7	199 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	KANK2	Q63ZY3	851 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	TMEM81	Q6P7N7	255 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	NPSR1	Q6W5P4	371 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	B3GNT6	Q6ZMB0	384 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	ACAD11	Q709F0	780 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	IKBIP	Q70UQ0	350 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	NUP54	Q7Z3B4	507 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	PACS2	Q86VP3	889 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	LIX1	Q8N485	282 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	OR2T11	Q8NH01	316 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	TMBIM1	Q969X1	311 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	TMEM41A	Q96HV5	264 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	VSTM2L	Q96N03	204 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	OSBPL11	Q9BXB4	747 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	TUBB1	Q9H4B7	451 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	RUBCNL	Q9H714	662 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	FOLH1B	Q9HBA9	442 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	LRTM1	Q9HBL6	345 aa		12.79	□□□□□ -0.36
ACADVL-222	ENST00000579894	PRAMEF25	A6NGN4	478 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	TMEM233	B4DJY2	109 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	NPIPB8	E9PQR5	432 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	SLC28A1	O00337	649 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	GNB5	O14775	395 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	ZNF500	O60304	480 aa	Predicted RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	PLOD3	O60568	738 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	SEC22B	O75396	215 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	JUN	P05412	331 aa	Known RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	HPN	P05981	417 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	CHRNG	P07510	517 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	CT45A8	P0DMV1	189 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	CT45A9	P0DMV2	189 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	GLI4	P10075	376 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	NEFH	P12036	1026 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	TACR1	P25103	407 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	PTPN6	P29350	595 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	NTS	P30990	170 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	MPI	P34949	423 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	PTGDS	P41222	190 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	MC3R	P41968	323 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	NCBP2	P52298	156 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	ZNF155	Q12901	538 aa	Predicted RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	KIAA0040	Q15053	153 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	CT45A2	Q5DJT8	189 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	ANGPTL8	Q6UXH0	198 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	RNF165	Q6ZSG1	346 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	METTL2A	Q96IZ6	378 aa	Known RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	FCRL1	Q96LA6	429 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	TTYH2	Q9BSA4	534 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	TRIM8	Q9BZR9	551 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	ROPN1B	Q9BZX4	212 aa	Predicted RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	ROPN1	Q9HAT0	212 aa	Predicted RBP	12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	GALNT9	Q9HCQ5	603 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	C1orf109	Q9NX04	203 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	TAS2R7	Q9NYW3	318 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	KLRF1	Q9NZS2	232 aa		12.78	□□□□□ -0.36
ACADVL-222	ENST00000579894	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	NKX2-6	A6NCS4	301 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	OR6C70	A6NIJ9	312 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	SNPH	O15079	494 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	RGS14	O43566	566 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	NPHS1	O60500	1241 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	COQ9	O75208	318 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	REM1	O75628	298 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	TRAPPC6A	O75865	159 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	CREB1	P16220	341 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	RPL38	P63173	70 aa	Known RBP	12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	CRYZ	Q08257	329 aa	Known RBP	12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	TIGD3	Q6B0B8	471 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	SLC30A6	Q6NXT4	461 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	TMEM107	Q6UX40	140 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894		Q6ZSR9	355 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	ZCCHC23	Q6ZST2	131 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	GDF7	Q7Z4P5	450 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	ACBD4	Q8NC06	268 aa		12.77	□□□□□ -0.37
ACADVL-222	ENST00000579894	OR1J4	Q8NGS1	313 aa		12.77	□□□□□ -0.37

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