RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 BHLHE41Q9C0J9 482 aaPredicted RBP19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 PRODH2Q9UF12 536 aa19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 GPR55Q9Y2T6 319 aaPredicted RBP19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 SNX8Q9Y5X2 465 aa19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 NPFFR2Q9Y5X5 522 aa19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 COPG1Q9Y678 874 aaKnown RBP19.99■□□□□ 0.79
CDC42EP4-203ENST00000578516 GXYLT2A0PJZ3 443 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 UBDO15205 165 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 POLR3GO15318 223 aaPredicted RBP19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 CFLARO15519 480 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 SCN2BO60939 215 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 COQ9O75208 318 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 ACP2P11117 423 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 MST1P26927 711 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 UQCRFS1P47985 274 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 DNASE1L1P49184 302 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 HBA1P69905 142 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 PSG6Q00889 435 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 PLCXD2Q0VAA5 305 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 RNFT1Q5M7Z0 435 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 PAOXQ6QHF9 649 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 NUP43Q8NFH3 380 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 OR5P2Q8WZ92 322 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 TMBIM1Q969X1 311 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 TP53INP1Q96A56 240 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 TMEM125Q96AQ2 219 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 BTBD9Q96Q07 612 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 ATAD3AQ9NVI7 634 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 HRH3Q9Y5N1 445 aa19.98■□□□□ 0.79
CDC42EP4-203ENST00000578516 FRG2CA6NGY1 282 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 ZNHIT1O43257 154 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 PEX1O43933 1283 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 RASAL1O95294 804 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 CPSF4O95639 269 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 MDH1P40925 334 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 KIR3DL1P43629 444 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 PPICP45877 212 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 PDCD4Q53EL6 469 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 RPUSD3Q6P087 351 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 FAM180AQ6UWF9 173 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 GALNT10Q86SR1 603 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 TAGAPQ8N103 731 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 TMEM178AQ8NBL3 297 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 TESCQ96BS2 214 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 ERP27Q96DN0 273 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 INPP5KQ9BT40 448 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 PROK2Q9HC23 129 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 SH2D2AQ9NP31 389 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 TIMMDC1Q9NPL8 285 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 ZCCHC3Q9NUD5 404 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 TAS2R9Q9NYW1 312 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 FLRT3Q9NZU0 649 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 CNOT11Q9UKZ1 510 aaKnown RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 CFL2Q9Y281 166 aa19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 CHCHD2Q9Y6H1 151 aaPredicted RBP19.97■□□□□ 0.79
CDC42EP4-203ENST00000578516 UGT2B11O75310 529 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 VIMP08670 466 aaKnown RBP19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 CASP9P55211 416 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 FOXK1P85037 733 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 MRPL49Q13405 166 aaKnown RBP19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 GAB1Q13480 694 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 RPS6KA2Q15349 733 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 NTRK2Q16620 822 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 GPALPP1Q8IXQ4 340 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 HORMAD2Q8N7B1 307 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 OR4A15Q8NGL6 344 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 PIK3R3Q92569 461 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 EFHD2Q96C19 240 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 MS4A4EQ96PG1 132 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 NODALQ96S42 347 aa19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 PRPF18Q99633 342 aaKnown RBP19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 KLF13Q9Y2Y9 288 aaPredicted RBP19.96■□□□□ 0.79
CDC42EP4-203ENST00000578516 A0A0G2JND7 137 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 C17orf51A8MQB3 221 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 EMC8O43402 210 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 BCAS2O75934 225 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 TGDSO95455 350 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 IDO1P14902 403 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 DRD5P21918 477 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 S100A3P33764 101 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 CDKN2CP42773 168 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 RFX3P48380 749 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 CLNS1AP54105 237 aaKnown RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 RPS26P62854 115 aaKnown RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 TP53BP2Q13625 1128 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 MLC1Q15049 377 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 MFSD12Q6NUT3 480 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 DNAJC14Q6Y2X3 702 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 SLC34A3Q8N130 599 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 SLC15A4Q8N697 577 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 C17orf47Q8NEP4 570 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 OR2M7Q8NG81 312 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 OR8J2Q8NGG1 315 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 HGDQ93099 445 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 CCDC28BQ9BUN5 200 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 TMEM120AQ9BXJ8 343 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 SERHL2Q9H4I8 314 aa19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 SDR39U1Q9NRG7 319 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 TUBA8Q9NY65 449 aaPredicted RBP19.95■□□□□ 0.78
CDC42EP4-203ENST00000578516 ZNF407Q9C0G0 2248 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms