RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 TRIM42Q8IWZ5 723 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 GALNT12Q8IXK2 581 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 VWA5B2Q8N398 1253 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 MMGT1Q8N4V1 131 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 FADS6Q8N9I5 356 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SRFBP1Q8NEF9 429 aaKnown RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OR4K14Q8NGD5 310 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OR52R1Q8NGF1 315 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OR5M1Q8NGP8 315 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OR10Q1Q8NGQ4 319 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OR9A2Q8NGT5 310 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SLC22A8Q8TCC7 542 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 ZPLD1Q8TCW7 415 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 ZNF675Q8TD23 568 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 TRPC4APQ8TEL6 797 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 DIO2Q92813 273 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 KAT2AQ92830 837 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 RNASE6Q93091 150 aaKnown RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 UBE2E3Q969T4 207 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 TMBIM1Q969X1 311 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SARAFQ96BY9 339 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 MBD6Q96DN6 1003 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 STARD4Q96DR4 205 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 OMA1Q96E52 524 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SLC35A4Q96G79 324 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 RBM18Q96H35 190 aaKnown RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 EGLN2Q96KS0 407 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 ZNF597Q96LX8 424 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 JSRP1Q96MG2 331 aaPredicted RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 BTBD9Q96Q07 612 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SECISBP2Q96T21 854 aaKnown RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 PAFAH2Q99487 392 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 SERPINI1Q99574 410 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 DOHHQ9BU89 302 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 VPS11Q9H270 941 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 CLEC4MQ9H2X3 399 aaPredicted RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 TUBB1Q9H4B7 451 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 FBXO34Q9NWN3 711 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 MS4A12Q9NXJ0 267 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 ALKBH4Q9NXW9 302 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 GALNT8Q9NY28 637 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 COPS7AQ9UBW8 275 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 ADGRE2Q9UHX3 823 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 BOKQ9UMX3 212 aaPredicted RBP4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 TIMM22Q9Y584 194 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 MXRA5Q9NR99 2828 aa4.03□□□□□ -1.76
PPP4R1-209ENST00000578329 CUBNO60494 3623 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 C15orf38-AP3S2A0A0A6YYH1 394 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 IQANK1A0A1B0GTG1 560 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 A0A1W2PNV4 684 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GXYLT2A0PJZ3 443 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FRG2CA6NGY1 282 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CLCA1A8K7I4 914 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 HSPB2A8KAH6 182 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 A8MXE2 369 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MYO1GB0I1T2 1018 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SHISA8B8ZZ34 492 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 UPK1AO00322 258 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 PLOD2O00469 737 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 OIP5O43482 229 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 OR10H2O60403 315 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 AQP8O94778 261 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 RCBTB2O95199 551 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SNX4O95219 450 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 C1QCP02747 245 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SHBGP04278 402 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 EPXP11678 715 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CYP4B1P13584 511 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CD99P14209 185 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 GABRA1P14867 456 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 NAGAP17050 411 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 IL11P20809 199 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 NT5EP21589 574 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 EDNRAP25101 427 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CTSSP25774 331 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SHC1P29353 583 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 SERPINB3P29508 390 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 TYK2P29597 1187 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 UQCRC1P31930 480 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 BUD31P41223 144 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 KIR2DL3P43628 341 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 PPICP45877 212 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 RAP1GDS1P52306 607 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MAPK12P53778 367 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CLDN20P56880 219 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CAV1Q03135 178 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 PLAURQ03405 335 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CLCQ05315 142 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 TGM3Q08188 693 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FAM27E3Q08E93 113 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 MYBPHQ13203 477 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 RCN2Q14257 317 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 POU4F3Q15319 338 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 HSPB2Q16082 182 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 UAP1Q16222 522 aaPredicted RBP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 FAM83EQ2M2I3 478 aa4.02□□□□□ -1.77
PPP4R1-209ENST00000578329 CTU2Q2VPK5 515 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms