RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 OLFM2O95897 454 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ASGR2P07307 311 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 PVRP15151 417 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 NT5EP21589 574 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 CXCR2P25025 360 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ODF4Q2M2E3 257 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SYT9Q86SS6 491 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SHISA5Q8N114 240 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 METTL27Q8N6F8 245 aaPredicted RBP12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ITPKCQ96DU7 683 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 MAGEB10Q96LZ2 347 aaPredicted RBP12.88□□□□□ -0.35
NDEL1-204ENST00000578172 OPALINQ96PE5 141 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 FAIM2Q9BWQ8 316 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SERGEFQ9UGK8 458 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 B3GNT3Q9Y2A9 372 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 MEN1O00255 615 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HMGN4O00479 90 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SLC30A4O14863 429 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 NPC1O15118 1278 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HPGDSO60760 199 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 PDE9AO76083 593 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HSD3B1P14060 373 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 CD72P21854 359 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HSD3B2P26439 372 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 GRPRP30550 384 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF367Q7RTV3 350 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 BBS1Q8NFJ9 593 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 OR52P1PQ8NH57 321 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 OR5P2Q8WZ92 322 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 TSACCQ96A04 125 aaPredicted RBP12.88□□□□□ -0.35
NDEL1-204ENST00000578172 RSPRY1Q96DX4 576 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 MRGPRX3Q96LB0 322 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SLC38A2Q96QD8 506 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
NDEL1-204ENST00000578172 GSTK1Q9Y2Q3 226 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SLC9A3R1O14745 358 aaPredicted RBP12.88□□□□□ -0.35
NDEL1-204ENST00000578172 LDB3O75112 727 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HBQ1P09105 142 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ACTR1BP42025 376 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 ACTR1AP61163 376 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 DEFB110Q30KQ9 67 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 LRIT3Q3SXY7 679 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 CDC73Q6P1J9 531 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 PDZD3Q86UT5 571 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 RETREG1Q9H6L5 497 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 HHATLQ9HCP6 504 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SLC35C2Q9NQQ7 365 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 FBXL12Q9NXK8 326 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 SPHK1Q9NYA1 384 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 GTF2A1LQ9UNN4 478 aa12.88□□□□□ -0.35
NDEL1-204ENST00000578172 TRIOO75962 3097 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 LOC102723532A0A0G2JNH3 316 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 H0Y8X5 98 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 KIAA0355O15063 1070 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 P2RY2P41231 377 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 HTR2BP41595 481 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 RBBP4Q09028 425 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 WSCD2Q2TBF2 565 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 FAM27D1Q5T7N8 215 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 OTPQ5XKR4 325 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 PGBD2Q6P3X8 592 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 PLBD1Q6P4A8 553 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 ENPP7Q6UWV6 458 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 RNF44Q7L0R7 432 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 COMTD1Q86VU5 262 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 NKAIN4Q8IVV8 208 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 LRRC20Q8TCA0 184 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 MCHR1Q99705 422 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 GPA33Q99795 319 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 MYNNQ9NPC7 610 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 C12orf71A8MTZ7 269 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 FAM171A2A8MVW0 826 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 UGDHO60701 494 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 SLC2A2P11168 524 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 IL7P13232 177 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 GIPRP48546 466 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 SCN1BQ07699 218 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 ELAVL3Q14576 367 aaKnown RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF267Q14586 743 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 GXYLT1Q4G148 440 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 NLRP8Q86W28 1048 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 OR8J1Q8NGP2 316 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF566Q969W8 418 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 QRFPRQ96P65 431 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 MND1Q9BWT6 205 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 CLEC4MQ9H2X3 399 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 FBXO8Q9NRD0 319 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 GPR55Q9Y2T6 319 aaPredicted RBP12.87□□□□□ -0.35
NDEL1-204ENST00000578172 CMAHPQ9Y471 501 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 NOX1Q9Y5S8 564 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 ZNF45Q02386 682 aa12.87□□□□□ -0.35
NDEL1-204ENST00000578172 IRF3Q14653 427 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms