RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 TSPAN10Q9H1Z9 355 aaPredicted RBP17.77■□□□□ 0.44
SS18-208ENST00000577751 FLNCQ14315 2725 aa17.77■□□□□ 0.43
SS18-208ENST00000577751 HIVEP3Q5T1R4 2406 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 SLCO1B7G3V0H7 640 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 G3V3Y1 287 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 SDHDO14521 159 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 TP53I11O14683 189 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 HDAC3O15379 428 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 SEMA7AO75326 666 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 PPM1BO75688 479 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 STSP08842 583 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 LAMP1P11279 417 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 DNASE1L1P49184 302 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 DIO3P55073 304 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 MANFP55145 182 aaKnown RBP17.76■□□□□ 0.43
SS18-208ENST00000577751 CORO7P57737 925 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 PSG6Q00889 435 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 HSPB3Q12988 150 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 OGFOD2Q6N063 350 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 NPSR1Q6W5P4 371 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 RGS9BPQ6ZS82 235 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 CAMKMTQ7Z624 323 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 WDR75Q8IWA0 830 aaKnown RBP17.76■□□□□ 0.43
SS18-208ENST00000577751 KRTCAP2Q8N6L1 136 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 NATD1Q8N6N6 113 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 SPPL2AQ8TCT8 520 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 NUDT8Q8WV74 236 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 OMA1Q96E52 524 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 TTTY12Q9BZ98 90 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 IL1RL2Q9HB29 575 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 DDX18Q9NVP1 670 aaKnown RBP17.76■□□□□ 0.43
SS18-208ENST00000577751 NTMQ9P121 344 aa17.76■□□□□ 0.43
SS18-208ENST00000577751 NINQ8N4C6 2090 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 HS6ST1O60243 411 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 ZIC2O95409 532 aaPredicted RBP17.75■□□□□ 0.43
SS18-208ENST00000577751 LBPP18428 481 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 PSPHP78330 225 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 CMPK2Q5EBM0 449 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 TBCELQ5QJ74 424 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 CPTPQ5TA50 214 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 TMEM81Q6P7N7 255 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 NUP54Q7Z3B4 507 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 CHERPQ8IWX8 916 aaKnown RBP17.75■□□□□ 0.43
SS18-208ENST00000577751 SLC34A3Q8N130 599 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 OR52N2Q8NGI0 321 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 OR5M3Q8NGP4 307 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 PIWIL2Q8TC59 973 aaKnown RBP17.75■□□□□ 0.43
SS18-208ENST00000577751 HGDQ93099 445 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 PLSCR2Q9NRY7 297 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 TUBA8Q9NY65 449 aaPredicted RBP17.75■□□□□ 0.43
SS18-208ENST00000577751 MARCOQ9UEW3 520 aaPredicted RBP17.75■□□□□ 0.43
SS18-208ENST00000577751 MAPRE3Q9UPY8 281 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 OSGIN2Q9Y236 505 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 ZNF835Q9Y2P0 537 aa17.75■□□□□ 0.43
SS18-208ENST00000577751 TRPC5OSA6NMA1 111 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 TFECO14948 347 aaPredicted RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 ANKRD28O15084 1053 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 KITP10721 976 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 CASP3P42574 277 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 CDK9P50750 372 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 PPIAP62937 165 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 PPP2R2AP63151 447 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 PLGLB1Q02325 96 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 PLCXD2Q0VAA5 305 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 PRAMEF20Q5VT98 475 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 SLC22A16Q86VW1 577 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 GHDCQ8N2G8 530 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 DIO2Q92813 273 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 HOXB13Q92826 284 aaPredicted RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 SLC35A4Q96G79 324 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 MAGED4Q96JG8 741 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 MAELQ96JY0 434 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 PRPF18Q99633 342 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 LMF2Q9BU23 707 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 ANGPTL4Q9BY76 406 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 BHLHE41Q9C0J9 482 aaPredicted RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 ZDHHC11Q9H8X9 412 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 ATAD3AQ9NVI7 634 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 ZNF446Q9NWS9 450 aa17.74■□□□□ 0.43
SS18-208ENST00000577751 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.74■□□□□ 0.43
SS18-208ENST00000577751 A0A1W2PRB8 838 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 OR6C70A6NIJ9 312 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 ZNF195O14628 629 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 TSPAN2O60636 221 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 UGT2B11O75310 529 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 TRIM3O75382 744 aaPredicted RBP17.73■□□□□ 0.43
SS18-208ENST00000577751 GPC1P35052 558 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 MAP3K8P41279 467 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 KCNJ2P63252 427 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 RPP38P78345 283 aaKnown RBP17.73■□□□□ 0.43
SS18-208ENST00000577751 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.73■□□□□ 0.43
SS18-208ENST00000577751 DESI1Q6ICB0 168 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 TMEM251Q8N6I4 163 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 PSMA8Q8TAA3 256 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 OR5P2Q8WZ92 322 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 TMBIM1Q969X1 311 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 C7orf26Q96N11 449 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 WDR55Q9H6Y2 383 aaPredicted RBP17.73■□□□□ 0.43
SS18-208ENST00000577751 ZFP64Q9NPA5 681 aa17.73■□□□□ 0.43
SS18-208ENST00000577751 SIRT3Q9NTG7 399 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms