RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ZC3HAV1LQ96H79 300 aaKnown RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 MARK4Q96L34 752 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 RBBP8Q99708 897 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 LRRC1Q9BTT6 524 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 ITPAQ9BY32 194 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 BRINP2Q9C0B6 783 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 OPN3Q9H1Y3 402 aaPredicted RBP12.08□□□□□ -0.48
COPS3-214ENST00000577246 AHSPQ9NZD4 102 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 WIF1Q9Y5W5 379 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 KIAA1549Q9HCM3 1950 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 DOCK7Q96N67 2140 aa12.08□□□□□ -0.48
COPS3-214ENST00000577246 STAB1Q9NY15 2570 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 CCDC189A1A4V9 331 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 FRG2CA6NGY1 282 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 OR6C70A6NIJ9 312 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 E7ESA3 106 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 UBXN8O00124 270 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 UGT2B11O75310 529 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 SEC31AO94979 1220 aaKnown RBP12.07□□□□□ -0.48
COPS3-214ENST00000577246 ATP1B1P05026 303 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 TBXA2RP21731 343 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 DRD5P21918 477 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 CCKARP32238 428 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 DEKP35659 375 aaKnown RBP12.07□□□□□ -0.48
COPS3-214ENST00000577246 KRT20P35900 424 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 GP5P40197 560 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 PPICP45877 212 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 DR1Q01658 176 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 MAP4K2Q12851 820 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 ATRQ13535 2644 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 EFR3AQ14156 821 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 CPSF6Q16630 551 aaKnown RBP eCLIP12.07□□□□□ -0.48
COPS3-214ENST00000577246 C10orf62Q5T681 223 aaPredicted RBP12.07□□□□□ -0.48
COPS3-214ENST00000577246 ZNF550Q7Z398 422 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 BTLAQ7Z6A9 289 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 ISCA2Q86U28 154 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 ZBED8Q8IZ13 594 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 COL21A1Q96P44 957 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 ADAM29Q9UKF5 820 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 PSME2Q9UL46 239 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 PROCRQ9UNN8 238 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 DTX4Q9Y2E6 619 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 ZNF175Q9Y473 711 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 NINQ8N4C6 2090 aa12.07□□□□□ -0.48
COPS3-214ENST00000577246 A0A1W2PS29 197 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 EFCAB8A8MWE9 144 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 LINC01387J3KSC0 135 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 TO15178 435 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 TNFRSF21O75509 655 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 GBAP04062 536 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 C8BP07358 591 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 FCGR2AP12318 317 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 CSNK2A2P19784 350 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 S1PR1P21453 382 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 DPP4P27487 766 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 CRABP2P29373 138 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 SPRP35270 261 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 KIR2DL2P43627 348 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 DSCR4P56555 118 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 SIRPAP78324 504 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 MRPS22P82650 360 aaKnown RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 TNK1Q13470 666 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 VEZF1Q14119 521 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 FASTKD3Q14CZ7 662 aaKnown RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 PRICKLE4Q2TBC4 344 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 ZNF704Q6ZNC4 412 aaPredicted RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 SH2D5Q6ZV89 423 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 UBQLNLQ8IYU4 475 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 ZNF611Q8N823 705 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 OR4K17Q8NGC6 315 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 PYROXD1Q8WU10 500 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 IGFBPL1Q8WX77 278 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 TRMT61AQ96FX7 289 aaKnown RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 ATOH8Q96SQ7 321 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 KLHL4Q9C0H6 718 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 EHD3Q9NZN3 535 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 FBXL2Q9UKC9 423 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 SNX12Q9UMY4 172 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 TNPO3Q9Y5L0 923 aaKnown RBP12.06□□□□□ -0.48
COPS3-214ENST00000577246 ARID1AO14497 2285 aa12.06□□□□□ -0.48
COPS3-214ENST00000577246 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 C1orf226A1L170 272 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 HS3ST1O14792 307 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 REM1O75628 298 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 BCAS2O75934 225 aaPredicted RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 LTA4HP09960 611 aaKnown RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 GFAPP14136 432 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 LOXP28300 417 aaPredicted RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 IL12BP29460 328 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 ARL1P40616 181 aaPredicted RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 NEK2P51955 445 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 MAPK12P53778 367 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 RPS4XP62701 263 aaKnown RBP12.05□□□□□ -0.48
COPS3-214ENST00000577246 OCRLQ01968 901 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 CCNYL2Q5T2Q4 361 aa12.05□□□□□ -0.48
COPS3-214ENST00000577246 DESI1Q6ICB0 168 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms