RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 PRDM4Q9UKN5 801 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 ATG4BQ9Y4P1 393 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 PCNX1Q96RV3 2341 aa5.73□□□□□ -1.49
NUP88-212ENST00000576708 GTF3C1Q12789 2109 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 TEP1Q99973 2627 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 A0A0G2JNJ9 132 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 A0A1W2PR48 441 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 KDM4EB2RXH2 506 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 K7EPI3 171 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PLPP1O14494 284 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 EEDO75530 441 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 APOL3O95236 402 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 GBAP04062 536 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 MTHFD2P13995 350 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 IGFBP2P18065 325 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 GSTM2P28161 218 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SPRP35270 261 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 MAGEA4P43358 317 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 STT3AP46977 705 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PIK3CGP48736 1102 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 NEK2P51955 445 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PLTPP55058 493 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 HNRNPH2P55795 449 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 DLX5P56178 289 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 WNT3P56703 355 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 RPS13P62277 151 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 HERVK_113P63132 956 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ERVK-8P63133 956 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 IL13RA1P78552 427 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 IGLV3-21P80748 117 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 OCRLQ01968 901 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 FOLH1Q04609 750 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SERTAD2Q14140 314 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 E2F2Q14209 437 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ZNF267Q14586 743 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 ZNF791Q3KP31 576 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 PIGGQ5H8A4 983 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PAGE2BQ5JRK9 111 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 CDKL4Q5MAI5 379 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 DEPDC1Q5TB30 811 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 GRTP1Q5TC63 336 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PRAMEF20Q5VT98 475 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 KHDRBS2Q5VWX1 349 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 GRHL2Q6ISB3 625 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 OPN5Q6U736 354 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 TMEM64Q6YI46 380 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 TRILQ7L0X0 811 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 GPR180Q86V85 440 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SLC22A16Q86VW1 577 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 MYLK4Q86YV6 388 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 LAS2Q8IYD9 372 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 CENPLQ8N0S6 344 aaPredicted RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 EID3Q8N140 333 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 FAM109AQ8N4B1 249 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 TEX9Q8N6V9 391 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 BBOF1Q8ND07 529 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SPATA4Q8NEY3 305 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 OR5L2Q8NGL0 311 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 OR10Q1Q8NGQ4 319 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 HUS1BQ8NHY5 278 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 STAG3L4Q8TBR4 150 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 FBXO25Q8TCJ0 367 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ASB5Q8WWX0 329 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 CDKL2Q92772 493 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 CMTM7Q96FZ5 175 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 DGAT2Q96PD7 388 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 MTERF1Q99551 399 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 FAM173AQ9BQD7 235 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 TTYH2Q9BSA4 534 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ERVK-6Q9BXR3 956 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ROGDIQ9GZN7 287 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SLC6A15Q9H2J7 730 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 RPF2Q9H7B2 306 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 IL1RL2Q9HB29 575 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 PROK2Q9HC23 129 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 KCNJ16Q9NPI9 418 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SACM1LQ9NTJ5 587 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 NUDT4Q9NZJ9 180 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 OPTCQ9UBM4 332 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 Q9UFV3 132 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 ERVK-19Q9WJR5 959 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 FAM215AQ9Y5M1 114 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.72□□□□□ -1.49
NUP88-212ENST00000576708 PKDREJQ9NTG1 2253 aa5.72□□□□□ -1.49
NUP88-212ENST00000576708 EML6Q6ZMW3 1958 aa5.71□□□□□ -1.49
NUP88-212ENST00000576708 A0A1B0GVC2 190 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 LRRC3CA6NJW4 275 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 PGRMC2O15173 223 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 EIF3HO15372 352 aaKnown RBP eCLIP5.71□□□□□ -1.5
NUP88-212ENST00000576708 PROM1O43490 865 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 TMPRSS11DO60235 418 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 KLK8O60259 260 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 KERAO60938 352 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 SCELO95171 688 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 SIX3O95343 332 aaPredicted RBP5.71□□□□□ -1.5
NUP88-212ENST00000576708 KNG1P01042 644 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 IGHG3P01860 377 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 CLPSP04118 112 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 IGKV3-11P04433 115 aa5.71□□□□□ -1.5
NUP88-212ENST00000576708 P04436 131 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms