RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 RILPQ96NA2 401 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 BTBD9Q96Q07 612 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 ANGPTL4Q9BY76 406 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 CENPHQ9H3R5 247 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 SSU72Q9NP77 194 aaKnown RBP12.7□□□□□ -0.38
NDE1-211ENST00000576502 ACKR4Q9NPB9 350 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 KLRF1Q9NZS2 232 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 SLC17A7Q9P2U7 560 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 MRTO4Q9UKD2 239 aaKnown RBP12.7□□□□□ -0.38
NDE1-211ENST00000576502 GPR55Q9Y2T6 319 aaPredicted RBP12.7□□□□□ -0.38
NDE1-211ENST00000576502 OR10H1Q9Y4A9 318 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 CACNA1CQ13936 2221 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 MAST4O15021 2626 aa12.7□□□□□ -0.38
NDE1-211ENST00000576502 PHF3Q92576 2039 aaKnown RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 CACNA1DQ01668 2161 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 OR6C70A6NIJ9 312 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 TM9SF1O15321 606 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 PDPK1O15530 556 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 TRIM3O75382 744 aaPredicted RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 REM1O75628 298 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 JUNP05412 331 aaKnown RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 BPGMP07738 259 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 GABRA1P14867 456 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 ACVR2AP27037 513 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 PTGER4P35408 488 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 CASP3P42574 277 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 RPL38P63173 70 aaKnown RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 DUSP2Q05923 314 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 ZNF844Q08AG5 666 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 ZNF155Q12901 538 aaPredicted RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 NNATQ16517 81 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 ZNF630Q2M218 657 aaPredicted RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 SH2D4BQ5SQS7 431 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 FAM219BQ5XKK7 198 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 TMEM64Q6YI46 380 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 FGD2Q7Z6J4 655 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 NUDCD3Q8IVD9 361 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 RND1Q92730 232 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 PPCDCQ96CD2 204 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 ZBED6CLQ96FA7 236 aaPredicted RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 COL21A1Q96P44 957 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 DMRTA2Q96SC8 542 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 MECRQ9BV79 373 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 C3orf14Q9HBI5 128 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
NDE1-211ENST00000576502 DTX4Q9Y2E6 619 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 PCDHGB3Q9Y5G1 929 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 DNAJC15Q9Y5T4 150 aa12.69□□□□□ -0.38
NDE1-211ENST00000576502 LRRC3CA6NJW4 275 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 PLOD2O00469 737 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 BIRC5O15392 142 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 TYROBPO43914 113 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 TRAPPC6AO75865 159 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 HSPA4LO95757 839 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 CHRNGP07510 517 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 LINC00032P0C843 101 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 COL8A1P27658 744 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 GPC1P35052 558 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 HPCAL1P37235 193 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 PSMD4P55036 377 aaKnown RBP12.68□□□□□ -0.38
NDE1-211ENST00000576502 KIAA0040Q15053 153 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 TOMM20Q15388 145 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 GALNTL6Q49A17 601 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 ATP6AP1LQ52LC2 224 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 CEP85LQ5SZL2 805 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 SP5Q6BEB4 398 aaPredicted RBP12.68□□□□□ -0.38
NDE1-211ENST00000576502 HIST2H2BCQ6DN03 193 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 ZNF585AQ6P3V2 769 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 LRIG3Q6UXM1 1119 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 B3GNT6Q6ZMB0 384 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 C3P1Q6ZMU1 363 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 OR1J4Q8NGS1 313 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.68□□□□□ -0.38
NDE1-211ENST00000576502 SDCCAG3Q96C92 435 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 MTERF3Q96E29 417 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 REEP4Q9H6H4 257 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 FOLH1BQ9HBA9 442 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 TNFRSF12AQ9NP84 129 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 C19orf53Q9UNZ5 99 aaPredicted RBP12.68□□□□□ -0.38
NDE1-211ENST00000576502 C15orf41Q9Y2V0 281 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 CCL27Q9Y4X3 112 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 ACTL7BQ9Y614 415 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 FREM3P0C091 2139 aa12.68□□□□□ -0.38
NDE1-211ENST00000576502 NOTCH2Q04721 2471 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 C15orf38-AP3S2A0A0A6YYH1 394 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 PRAMEF25A6NGN4 478 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 LSM1O15116 133 aaKnown RBP12.67□□□□□ -0.38
NDE1-211ENST00000576502 TBX19O60806 448 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 ZWINTO95229 277 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 LRATO95237 230 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 COX6B1P14854 86 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 CHRNB4P30926 498 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 MC3RP41968 323 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 SERPINB4P48594 390 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 DUSP8Q13202 625 aa12.67□□□□□ -0.38
NDE1-211ENST00000576502 MAD2L1Q13257 205 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms