RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PRAMEF25A6NGN4 478 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 FRG2CA6NGY1 282 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 GOLGA6L6A8MZA4 724 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 B4DXG7 233 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 UBXN8O00124 270 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 TO15178 435 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 ACOX3O15254 700 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 EMC8O43402 210 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 KLF4O43474 513 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 THBDP07204 575 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CD8BP10966 210 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 MTHFD2P13995 350 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CPMP14384 443 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 NT5EP21589 574 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CNTFP26441 200 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 PPICP45877 212 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CLDN15P56746 228 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 B3GALT5-AS1P59052 145 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 RAB10P61026 200 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 DLG1Q12959 904 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 PDIA2Q13087 525 aaKnown RBP9□□□□□ -0.97
CALCOCO2-227ENST00000575560 NNATQ16517 81 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 PRICKLE4Q2TBC4 344 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 PODNL1Q6PEZ8 512 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 FAM111BQ6SJ93 734 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 NUDT13Q86X67 352 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 TEX9Q8N6V9 391 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 ZNF610Q8N9Z0 462 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 WDR20Q8TBZ3 569 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 TMEM171Q8WVE6 324 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 EXT2Q93063 718 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CAVIN3Q969G5 261 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 RBBP8Q99708 897 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 ITPAQ9BY32 194 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CES1P1Q9UKY3 287 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 CFL2Q9Y281 166 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 PPP2R2CQ9Y2T4 447 aa9□□□□□ -0.97
CALCOCO2-227ENST00000575560 ANK2Q01484 3957 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 HEATR5AQ86XA9 2040 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 OR6C70A6NIJ9 312 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 SLC22A20A6NK97 555 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 SUPT3HB4E1H0 165 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 UGDHO60701 494 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 KERAO60938 352 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 SUPT3HO75486 399 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 TNFRSF21O75509 655 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 SEC31AO94979 1220 aaKnown RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 CBX7O95931 251 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ATP1B1P05026 303 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 NID1P14543 1247 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 TBXA2RP21731 343 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 EMDP50402 254 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 NEK2P51955 445 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 GAS1P54826 345 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ATP5J2P56134 94 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 PHEXP78562 749 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 DMTNQ08495 405 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 PLCXD2Q0VAA5 305 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 EXOSC7Q15024 291 aaKnown RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 GUSBP1Q15486 140 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ANKRD34AQ69YU3 496 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 CYS1Q717R9 158 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 P4HA3Q7Z4N8 544 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 MYLK4Q86YV6 388 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 HIPK1Q86Z02 1210 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 LRRC8AQ8IWT6 810 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ZNF611Q8N823 705 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 L3MBTL4Q8NA19 623 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 RNF138Q8WVD3 245 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 FIG4Q92562 907 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 REPS1Q96D71 796 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 TMCO6Q96DC7 493 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ZC3HAV1LQ96H79 300 aaKnown RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 ZNF845Q96IR2 970 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 SFXN2Q96NB2 322 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 CPNE1Q99829 537 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 LRRC1Q9BTT6 524 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 CXorf56Q9H5V9 222 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 RNF122Q9H9V4 155 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 NMRAL1Q9HBL8 299 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 MAT2BQ9NZL9 334 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 EHD3Q9NZN3 535 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 BCAP29Q9UHQ4 241 aa8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 GPR55Q9Y2T6 319 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO2-227ENST00000575560 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 RNF223E7ERA6 249 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 TSPAN2O60636 221 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 SEMA3DO95025 777 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 PLAUP00749 431 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 IFNA2P01563 188 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 PEPDP12955 493 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 SSTR1P30872 391 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 GP5P40197 560 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 KCNJ5P48544 419 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 SUCLG1P53597 346 aaKnown RBP8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 NR1H2P55055 460 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 SIRPAP78324 504 aa8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 CPSF6Q16630 551 aaKnown RBP eCLIP8.98□□□□□ -0.97
CALCOCO2-227ENST00000575560 TRMT12Q53H54 448 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms