RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 HSPBAP1Q96EW2 488 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SLC35G5Q96KT7 338 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SMAD5Q99717 465 aaKnown RBP15.82■□□□□ 0.12
NUP88-210ENST00000574867 NPAS2Q99743 824 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 ARHGAP9Q9BRR9 750 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 ACTRT3Q9BYD9 372 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 CDCP1Q9H5V8 836 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 EPS8L2Q9H6S3 715 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 SLC6A13Q9NSD5 602 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 TUBD1Q9UJT1 453 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 PCDHB14Q9Y5E9 798 aa15.82■□□□□ 0.12
NUP88-210ENST00000574867 MRASO14807 208 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 ITGA10O75578 1167 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 KRT75O95678 551 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 NPPAP01160 153 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 MAGEA8P43361 318 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 NRG3P56975 720 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 NFYCQ13952 458 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 TRMT5Q32P41 509 aaKnown RBP15.81■□□□□ 0.12
NUP88-210ENST00000574867 FCRLBQ6BAA4 426 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 POU5F2Q8N7G0 328 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 ZFP90Q8TF47 636 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 LMF1Q96S06 567 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 NXF5Q9H1B4 397 aaKnown RBP15.81■□□□□ 0.12
NUP88-210ENST00000574867 ADNPQ9H2P0 1102 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 Q9N2J8 555 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 GIN1Q9NXP7 522 aa15.81■□□□□ 0.12
NUP88-210ENST00000574867 TRBV5-3A0A0A0MS03 114 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 WWP2O00308 870 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 TO15178 435 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 OR2J2O76002 312 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 PPIBP23284 216 aaKnown RBP15.8■□□□□ 0.12
NUP88-210ENST00000574867 MAP3K8P41279 467 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 NR0B1P51843 470 aaKnown RBP15.8■□□□□ 0.12
NUP88-210ENST00000574867 PSG6Q00889 435 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 EXOSC6Q5RKV6 272 aaKnown RBP15.8■□□□□ 0.12
NUP88-210ENST00000574867 CDC73Q6P1J9 531 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 ANGPTL8Q6UXH0 198 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 CLEC4FQ8N1N0 589 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 MIPOL1Q8TD10 442 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 TM9SF4Q92544 642 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 JADE3Q92613 823 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 RASL10BQ96S79 203 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 STACQ99469 402 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 RNF32Q9H0A6 362 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 TPT1P8Q9HAU6 139 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 DUSP22Q9NRW4 184 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 GMEB1Q9Y692 573 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 NKX2-2O95096 273 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 ALOX5P09917 674 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 CT45A8P0DMV1 189 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 CT45A9P0DMV2 189 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 ANXA11P50995 505 aaKnown RBP15.8■□□□□ 0.12
NUP88-210ENST00000574867 SSR4P51571 173 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 KRT72Q14CN4 511 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 GTDC1Q4AE62 458 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 CT45A2Q5DJT8 189 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 PIGGQ5H8A4 983 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 DLEU7Q6UYE1 221 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 BEST3Q8N1M1 668 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 SLC9A6Q92581 669 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 TTC9Q92623 222 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 RCN3Q96D15 328 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 RAD21L1Q9H4I0 556 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 LIN28AQ9H9Z2 209 aaKnown RBP15.8■□□□□ 0.12
NUP88-210ENST00000574867 SLC25A37Q9NYZ2 338 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 STMN3Q9NZ72 180 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 SLAMF8Q9P0V8 285 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 MAP10Q9P2G4 905 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 LOC400499M0QZD8 3231 aa15.8■□□□□ 0.12
NUP88-210ENST00000574867 ZZEF1O43149 2961 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 DUXAA6NLW8 204 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ASNA1O43681 348 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 MAN1A2O60476 641 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 TRHRP34981 398 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 CASRP41180 1078 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 TMED10P49755 219 aaKnown RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 KHKP50053 298 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 CORO7P57737 925 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 CBX1P83916 185 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 KCNAB2Q13303 367 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 LINC00303Q3SY05 128 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 OPN5Q6U736 354 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 IGFL2Q6UWQ7 119 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 NPSR1Q6W5P4 371 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 LINC00696Q6ZRV3 163 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 HPS6Q86YV9 775 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 SLC44A2Q8IWA5 706 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 GPALPP1Q8IXQ4 340 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 DND1Q8IYX4 353 aaKnown RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 ADAMTS15Q8TE58 950 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ROPN1LQ96C74 230 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 C16orf58Q96GQ5 468 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 GID8Q9NWU2 228 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 VAPAQ9P0L0 249 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.79■□□□□ 0.12
NUP88-210ENST00000574867 TAGLN3Q9UI15 199 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 CORO2BQ9UQ03 480 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 OR10H1Q9Y4A9 318 aa15.79■□□□□ 0.12
NUP88-210ENST00000574867 ZNF451Q9Y4E5 1061 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms