RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 CTXN3Q4LDR2 81 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 NDUFAF5Q5TEU4 345 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 VASNQ6EMK4 673 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 MTFR2Q6P444 385 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 LRFN4Q6PJG9 635 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 RASSF6Q6ZTQ3 369 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TPGS1Q6ZTW0 290 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 HORMAD2Q8N7B1 307 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ZNF527Q8NB42 609 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ZNF485Q8NCK3 441 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 WBP2Q969T9 261 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 TMEM19Q96HH6 336 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 ERMAPQ96PL5 475 aaPredicted RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 SPRTNQ9H040 489 aaPredicted RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 ISYNA1Q9NPH2 558 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 NKIRAS2Q9NYR9 191 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 SCP2D1Q9UJQ7 156 aa13.6□□□□□ -0.23
SMG6-215ENST00000574501 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
SMG6-215ENST00000574501 TCRBV16S1A1N1A0A5B0 115 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 HNRNPCL2B2RXH8 293 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 M0R3H8 397 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 PI15O43692 258 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CH25HO95992 272 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 TGFB1P01137 390 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 HPXP02790 462 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 POU3F2P20265 443 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 ATP5C1P36542 298 aaKnown RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 EFNB1P98172 346 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 ZNF155Q12901 538 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 MBTPS1Q14703 1052 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CLEC12AQ5QGZ9 265 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 GRHL2Q6ISB3 625 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 NLRC3Q7RTR2 1065 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 COMMD6Q7Z4G1 85 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 LSRQ86X29 649 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 LRRC28Q86X40 367 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 KLBQ86Z14 1044 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 SIAH3Q8IW03 269 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 LILRB1Q8NHL6 650 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 SPRYD4Q8WW59 207 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 SCRN2Q96FV2 425 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 SFXN2Q96NB2 322 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 DDOQ99489 341 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 BRF2Q9HAW0 419 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 BRD7Q9NPI1 651 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 PTGFRNQ9P2B2 879 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 KIAA1671Q9BY89 1806 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 A0A1B0GVI7 797 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 NPIPB15A6NHN6 443 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 ANKDD1BA6NHY2 528 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 UGDHO60701 494 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 MT-ND4P03905 459 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 OR10A3P58181 314 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CDK5Q00535 292 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 TAP2Q03519 686 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 TSTA3Q13630 321 aaPredicted RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 CKAP5Q14008 2032 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 OPCMLQ14982 345 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 DUSP6Q16828 381 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 NHLRC3Q5JS37 347 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 SLC25A30Q5SVS4 291 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 FAM27D1Q5T7N8 215 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 KIAA1161Q6NSJ0 714 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 TFAP2EQ6VUC0 442 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 SLC36A4Q6YBV0 504 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 COMTD1Q86VU5 262 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 HS6ST3Q8IZP7 471 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 TOMM5Q8N4H5 51 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 LMNTD1Q8N9Z9 388 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CLP1Q92989 425 aaKnown RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 CHFRQ96EP1 664 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 SORBS1Q9BX66 1292 aaKnown RBP13.59□□□□□ -0.23
SMG6-215ENST00000574501 OR51B5Q9H339 312 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CXorf36Q9H7Y0 433 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 CD84Q9UIB8 345 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 KIF25Q9UIL4 384 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 RASD1Q9Y272 281 aa13.59□□□□□ -0.23
SMG6-215ENST00000574501 A0A0C4DFX4 3053 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 A0A0U1RQF3 1178 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 MMP20O60882 483 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ACSL1P33121 698 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 B2MP61769 119 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 GRB14Q14449 540 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 EOGTQ5NDL2 527 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 WASH2PQ6VEQ5 465 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 OLIG3Q7RTU3 272 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 OR4K5Q8NGD3 323 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 COQ8AQ8NI60 647 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 ADAMTS19Q8TE59 1207 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 UROC1Q96N76 676 aa13.58□□□□□ -0.24
SMG6-215ENST00000574501 UBL7Q96S82 380 aaPredicted RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 ZNF436Q9C0F3 470 aaPredicted RBP13.58□□□□□ -0.24
SMG6-215ENST00000574501 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms