RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 SIGLEC10Q96LC7 697 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 QRFPRQ96P65 431 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 WDR83Q9BRX9 315 aaKnown RBP4.67□□□□□ -1.66
TRIM25-208ENST00000574234 DRC3Q9H069 523 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 SLCO5A1Q9H2Y9 848 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 XAB2Q9HCS7 855 aaKnown RBP4.67□□□□□ -1.66
TRIM25-208ENST00000574234 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRIM25-208ENST00000574234 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRIM25-208ENST00000574234 HACD3Q9P035 362 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 SPRR3Q9UBC9 169 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 PCSK1NQ9UHG2 260 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 OAZ3Q9UMX2 235 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 ASF1AQ9Y294 204 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 ADAM18Q9Y3Q7 739 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 NINQ8N4C6 2090 aa4.67□□□□□ -1.66
TRIM25-208ENST00000574234 EXPH5Q8NEV8 1989 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 A0A0J9YVX5 310 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 A0A0U1RQJ8 604 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 NPIPB13A6NJU9 1138 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CD8B2A6NJW9 211 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 NPIPB5A8MRT5 1133 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 A8MXE2 369 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 MAGEB17A8MXT2 336 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FAM157AC9JC47 383 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 NPIPB4C9JG80 1138 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 F8VZ95 297 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 LIN7AO14910 233 aaPredicted RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 OR10H2O60403 315 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CDC14BO60729 498 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SHOX2O60902 331 aaPredicted RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 RNF8O76064 485 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 TGDSO95455 350 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FGFR1OPO95684 399 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 GPANK1O95872 356 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SELLP14151 372 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ATP1B2P14415 290 aaPredicted RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CHRNB2P17787 502 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PSMA2P25787 234 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 MIPP30301 263 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CPOXP36551 454 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ACVR1BP36896 505 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 MSH2P43246 934 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ZNF41P51814 821 aaPredicted RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 RPS7P62081 194 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PRAMEP78395 509 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PNOCQ13519 176 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CBFBQ13951 182 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SLC10A1Q14973 349 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ELAVL1Q15717 326 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SYT16Q17RD7 645 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FBLN7Q53RD9 439 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 NSUN5P2Q63ZY6 315 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CYB5R2Q6BCY4 276 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 DCUN1D2Q6PH85 259 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 NT5DC3Q86UY8 548 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SLC26A11Q86WA9 606 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PM20D2Q8IYS1 436 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 KIF2BQ8N4N8 673 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 TMEM156Q8N614 296 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ARIH2OSQ8N7S6 290 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 TMEM116Q8NCL8 245 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 BEND2Q8NDZ0 799 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PLPP5Q8NEB5 264 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 OR2L8Q8NGY9 312 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ZNF398Q8TD17 642 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FAM136AQ96C01 138 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CTHRC1Q96CG8 243 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 KLHL29Q96CT2 875 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 DCUN1D1Q96GG9 259 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SPATA13Q96N96 652 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ZFP3Q96NJ6 502 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FAM173AQ9BQD7 235 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 FICDQ9BVA6 458 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SFXN3Q9BWM7 321 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 SCPEP1Q9HB40 452 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 ACKR4Q9NPB9 350 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 MRPL15Q9P015 296 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 STOX2Q9P2F5 926 aaPredicted RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 WBP11Q9Y2W2 641 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 TDRKHQ9Y2W6 561 aaKnown RBP4.66□□□□□ -1.66
TRIM25-208ENST00000574234 PKP3Q9Y446 797 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 CCL27Q9Y4X3 112 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 DUSP10Q9Y6W6 482 aa4.66□□□□□ -1.66
TRIM25-208ENST00000574234 IGLV3-16A0A075B6K0 115 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 A0A0A6YYC8 382 aaPredicted RBP4.65□□□□□ -1.67
TRIM25-208ENST00000574234 TEX13CA0A0J9YWL9 993 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 OR2A25A4D2G3 310 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 C2orf81A6NN90 581 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 KDM4EB2RXH2 506 aaPredicted RBP4.65□□□□□ -1.67
TRIM25-208ENST00000574234 H0YGG7 62 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 I3L1I5 382 aaPredicted RBP4.65□□□□□ -1.67
TRIM25-208ENST00000574234 BIN1O00499 593 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 TXNDC9O14530 226 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 HS3ST1O14792 307 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 SLC16A5O15375 505 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 SPRY2O43597 315 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 MFSD11O43934 449 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 VPS26AO75436 327 aa4.65□□□□□ -1.67
TRIM25-208ENST00000574234 SRP72O76094 671 aaKnown RBP4.65□□□□□ -1.67
TRIM25-208ENST00000574234 SMC2O95347 1197 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms