RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 FAM46CQ5VWP2 391 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 OR4C11Q6IEV9 310 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 PRICKLE2Q7Z3G6 844 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 ABI3BPQ7Z7G0 1075 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 PLA2G15Q8NCC3 412 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 C17orf62Q9BQA9 187 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 SOSTQ9BQB4 213 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 TMED9Q9BVK6 235 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 SLC35C2Q9NQQ7 365 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CNIH4Q9P003 139 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 CLCA3PQ9Y6N3 262 aa14.72□□□□□ -0.05
NUP88-207ENST00000573584 FAM240BA0A1B0GVZ2 78 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 FAM170BA6NMN3 283 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 NCR1O76036 304 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 UBXN7O94888 489 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 LALBAP00709 142 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 PRKAR1AP10644 381 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 SLC1A3P43003 542 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 REEP5Q00765 189 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 CHRNEQ04844 493 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 LASP1Q14847 261 aaKnown RBP14.71□□□□□ -0.05
NUP88-207ENST00000573584 ARHGAP19Q14CB8 494 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 SYCE2Q6PIF2 218 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 TCTE3Q8IZS6 198 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 OR5K2Q8NHB8 316 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 GNPDA2Q8TDQ7 276 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 TRIM63Q969Q1 353 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 ZNF764Q96H86 408 aaPredicted RBP14.71□□□□□ -0.05
NUP88-207ENST00000573584 BBS4Q96RK4 519 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 DCLRE1CQ96SD1 692 aaKnown RBP14.71□□□□□ -0.05
NUP88-207ENST00000573584 DDX31Q9H8H2 851 aaKnown RBP14.71□□□□□ -0.05
NUP88-207ENST00000573584 ACOXLQ9NUZ1 547 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 MARK1Q9P0L2 795 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 KLHL21Q9UJP4 597 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 PCDHGB7Q9Y5F8 929 aa14.71□□□□□ -0.05
NUP88-207ENST00000573584 MKI67P46013 3256 aaKnown RBP14.71□□□□□ -0.05
NUP88-207ENST00000573584 NOTOA8MTQ0 251 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 PROM1O43490 865 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 LCMT2O60294 686 aaKnown RBP14.71□□□□□ -0.06
NUP88-207ENST00000573584 PRKRAO75569 313 aaKnown RBP14.71□□□□□ -0.06
NUP88-207ENST00000573584 HLA-DQB1P01920 261 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ALPPL2P10696 532 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ERGP11308 486 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 DDX6P26196 483 aaKnown RBP eCLIP14.71□□□□□ -0.06
NUP88-207ENST00000573584 ERP29P30040 261 aaKnown RBP14.71□□□□□ -0.06
NUP88-207ENST00000573584 IFNGR2P38484 337 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 SSR2P43308 183 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 FUT5Q11128 374 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 FAPQ12884 760 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ADCK2Q7Z695 626 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 MRGPREQ86SM8 312 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 PEX5LQ8IYB4 626 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ZNF485Q8NCK3 441 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 OR7G1Q8NGA0 311 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 SUN3Q8TAQ9 357 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 JPH3Q8WXH2 748 aaPredicted RBP14.71□□□□□ -0.06
NUP88-207ENST00000573584 ATF6BQ99941 703 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 NLKQ9UBE8 527 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ADAM29Q9UKF5 820 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 ALG5Q9Y673 324 aa14.71□□□□□ -0.06
NUP88-207ENST00000573584 CPNE3O75131 537 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 ERAL1O75616 437 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 CH25HO95992 272 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 HMGN2P05204 90 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 CELP19835 753 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 IL12RB1P42701 662 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 EVX1P49640 407 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 CDH11P55287 796 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 EFR3AQ14156 821 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 RRM2BQ7LG56 351 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 TP53I13Q8NBR0 393 aaPredicted RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 DUSP18Q8NEJ0 188 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 OR4F15Q8NGB8 312 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 ZSWIM3Q96MP5 696 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 B3GAT2Q9NPZ5 323 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 CARNS1A5YM72 827 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 KDM4EB2RXH2 506 aaPredicted RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 KIAA0355O15063 1070 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 CASC3O15234 703 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 LYRM1O43325 122 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 NDUFB5O43674 189 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 NTN1O95631 604 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 HLA-DPB1P04440 258 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 RHOP08100 348 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 CISD3P0C7P0 127 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 DRD2P14416 443 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 NTSP30990 170 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 GNG2P59768 71 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 TSPAN31Q12999 210 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 RPA4Q13156 261 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 GNA13Q14344 377 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 METAP1DQ6UB28 335 aaPredicted RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 ANKRD33Q7Z3H0 272 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 MARCH9Q86YJ5 346 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 NEIL3Q8TAT5 605 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 ZC3HAV1LQ96H79 300 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 FAM46AQ96IP4 442 aaKnown RBP14.7□□□□□ -0.06
NUP88-207ENST00000573584 GON7Q9BXV9 100 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
NUP88-207ENST00000573584 TM7SF3Q9NS93 570 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms