RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 WDR53Q7Z5U6 358 aaPredicted RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 CPSF7Q8N684 471 aaKnown RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 SLC15A4Q8N697 577 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 C17orf47Q8NEP4 570 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 OR10G3Q8NGC4 313 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 OR5M3Q8NGP4 307 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 ACTRT2Q8TDY3 377 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 TP53INP1Q96A56 240 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 THOC1Q96FV9 657 aaKnown RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 TEX37Q96LM6 180 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 FRMD6Q96NE9 622 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 BTBD9Q96Q07 612 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 EBF4Q9BQW3 602 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 DUSP26Q9BV47 211 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 TIMMDC1Q9NPL8 285 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 EQTNQ9NQ60 294 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 ACSS1Q9NUB1 689 aaPredicted RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 C19orf53Q9UNZ5 99 aaPredicted RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 KLF13Q9Y2Y9 288 aaPredicted RBP14.57□□□□□ -0.08
CHD3-215ENST00000572750 PCDHGB6Q9Y5F9 930 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 CSMD2Q7Z408 3487 aa14.57□□□□□ -0.08
CHD3-215ENST00000572750 A0A1W2PRB8 838 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 FRG2CA6NGY1 282 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 ERN1O75460 977 aaKnown RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 BCAS2O75934 225 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 C6orf47O95873 294 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 ABCB1P08183 1280 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 ABCD3P28288 659 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 RFC3P40938 356 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 AQP5P55064 265 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 NRG3P56975 720 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 RIPPLY3P57055 190 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 FBXW4P57775 412 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 UFM1P61960 85 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 PLCXD2Q0VAA5 305 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 LSM12Q3MHD2 195 aaKnown RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 OR4F3Q6IEY1 312 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 CAMKMTQ7Z624 323 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 ARFGAP2Q8N6H7 521 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 COQ8BQ96D53 544 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 LCORQ96JN0 433 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 PRPF18Q99633 342 aaKnown RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 BHLHE41Q9C0J9 482 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 SIRT3Q9NTG7 399 aaPredicted RBP14.56□□□□□ -0.08
CHD3-215ENST00000572750 DEPPQ9NTK1 212 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 TAS2R9Q9NYW1 312 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 GPR45Q9Y5Y3 372 aa14.56□□□□□ -0.08
CHD3-215ENST00000572750 E9PBE3 544 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 POLR3GO15318 223 aaPredicted RBP14.55□□□□□ -0.08
CHD3-215ENST00000572750 CT45A8P0DMV1 189 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 CT45A9P0DMV2 189 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 PPICP45877 212 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 IDH3AP50213 366 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 MEOX1P50221 254 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 GUCY1A3Q02108 690 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 MLC1Q15049 377 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 RPS6KA2Q15349 733 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 NTRK2Q16620 822 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 CT45A2Q5DJT8 189 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 SPANXN4Q5MJ08 99 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 PRAMEF20Q5VT98 475 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 ACAD11Q709F0 780 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 SULF2Q8IWU5 870 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 CLECL1Q8IZS7 167 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 BCORP1Q8N888 145 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 GOLM1Q8NBJ4 401 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 FAM98AQ8NCA5 519 aaKnown RBP14.55□□□□□ -0.08
CHD3-215ENST00000572750 FBXO30Q8TB52 745 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 TESCQ96BS2 214 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 OMA1Q96E52 524 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 BARD1Q99728 777 aaKnown RBP14.55□□□□□ -0.08
CHD3-215ENST00000572750 TSPAN10Q9H1Z9 355 aaPredicted RBP14.55□□□□□ -0.08
CHD3-215ENST00000572750 TCF7L2Q9NQB0 619 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 AGPAT4Q9NRZ5 378 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 OLAHQ9NV23 265 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 GPR55Q9Y2T6 319 aaPredicted RBP14.55□□□□□ -0.08
CHD3-215ENST00000572750 SNX8Q9Y5X2 465 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 NPFFR2Q9Y5X5 522 aa14.55□□□□□ -0.08
CHD3-215ENST00000572750 PINLYPA6NC86 204 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 ASPDHA6ND91 283 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 ACOX3O15254 700 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 PEX1O43933 1283 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 EDF1O60869 148 aaKnown RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 TGDSO95455 350 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 IFI6P09912 130 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 RNF224P0DH78 156 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 IDO1P14902 403 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 DRD5P21918 477 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 SOAT1P35610 550 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 KIR3DL1P43629 444 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 UQCRFS1P47985 274 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 TMED10P49755 219 aaKnown RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 CLNS1AP54105 237 aaKnown RBP14.54□□□□□ -0.08
CHD3-215ENST00000572750 PRKAG1P54619 331 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 WNT3P56703 355 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 DCAF7P61962 342 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 FAM174BQ3ZCQ3 159 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 DESI1Q6ICB0 168 aa14.54□□□□□ -0.08
CHD3-215ENST00000572750 ANKRD46Q86W74 232 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms