RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 HBEGFQ99075 208 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 TUBA1CQ9BQE3 449 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 OSBPL11Q9BXB4 747 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 MRPL46Q9H2W6 279 aaKnown RBP13.45□□□□□ -0.26
NDE1-203ENST00000570727 ANKRA2Q9H9E1 313 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 SERHLQ9NQF3 203 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 EHD3Q9NZN3 535 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 HEY2Q9UBP5 337 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 DMGDHQ9UI17 866 aaKnown RBP13.45□□□□□ -0.26
NDE1-203ENST00000570727 PSME2Q9UL46 239 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 SNX6Q9UNH7 406 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 GPR55Q9Y2T6 319 aaPredicted RBP13.45□□□□□ -0.26
NDE1-203ENST00000570727 PCNX3Q9H6A9 2034 aa13.45□□□□□ -0.26
NDE1-203ENST00000570727 TUBAL3A6NHL2 446 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 CBR3O75828 277 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TMIGD3P0DMS9 266 aaPredicted RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 CHN1P15882 459 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 OPRM1P35372 400 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 DCAF7P61962 342 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TRA2BP62995 288 aaKnown RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 MRPS35P82673 323 aaKnown RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 CKAP4Q07065 602 aaKnown RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 FOXF2Q12947 444 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TCHHL1Q5QJ38 904 aaPredicted RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 PLXDC2Q6UX71 529 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 KIF18BQ86Y91 864 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TRIM42Q8IWZ5 723 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 CCDC116Q8IYX3 515 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
NDE1-203ENST00000570727 KLHL29Q96CT2 875 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 UCN2Q96RP3 112 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 G6PC3Q9BUM1 346 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 OR2B2Q9GZK3 357 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 PLEKHF2Q9H8W4 249 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 VPS29Q9UBQ0 182 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 ZNF180Q9UJW8 692 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 MAPRE3Q9UPY8 281 aa13.44□□□□□ -0.26
NDE1-203ENST00000570727 FRG2CA6NGY1 282 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 EEF1E1-BLOC1S5C9J1V9 151 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 MANBAO00462 879 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 EEF1E1O43324 174 aaKnown RBP13.43□□□□□ -0.26
NDE1-203ENST00000570727 NME6O75414 186 aaPredicted RBP13.43□□□□□ -0.26
NDE1-203ENST00000570727 RCBTB2O95199 551 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CTAGE8P0CG41 777 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CT45A8P0DMV1 189 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CT45A9P0DMV2 189 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CYP4B1P13584 511 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 ALDH9A1P49189 494 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 STARP49675 285 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 GFRA1P56159 465 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 ADAM8P78325 824 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 RAE1P78406 368 aaKnown RBP13.43□□□□□ -0.26
NDE1-203ENST00000570727 SORDQ00796 357 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 HMGCS1Q01581 520 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CLCQ05315 142 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 PLCXD2Q0VAA5 305 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 FOXD4Q12950 439 aaPredicted RBP13.43□□□□□ -0.26
NDE1-203ENST00000570727 RCAN2Q14206 197 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CT45A2Q5DJT8 189 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 ZNF628Q5EBL2 1059 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 CTAGE4Q8IX94 777 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 RDH11Q8TC12 318 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 TMBIM1Q969X1 311 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 COL21A1Q96P44 957 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 ALPK1Q96QP1 1244 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 FAIM2Q9BWQ8 316 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 DLL4Q9NR61 685 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 NMRK1Q9NWW6 199 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 KLRF1Q9NZS2 232 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 PRODH2Q9UF12 536 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 UTS2RQ9UKP6 389 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 EDARQ9UNE0 448 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 ZNF780BQ9Y6R6 833 aa13.43□□□□□ -0.26
NDE1-203ENST00000570727 PRAMEF25A6NGN4 478 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 OR6C70A6NIJ9 312 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 B4DXG7 233 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 TSPAN2O60636 221 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 REM1O75628 298 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 HOXB4P17483 251 aaPredicted RBP13.42□□□□□ -0.26
NDE1-203ENST00000570727 ECHS1P30084 290 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 LHX2P50458 406 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 DGKQP52824 942 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 SRYQ05066 204 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 ZNF678Q5SXM1 525 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 PAMR1Q6UXH9 720 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 TAOK1Q7L7X3 1001 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 CAMKMTQ7Z624 323 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 PLCZ1Q86YW0 608 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 MMGT1Q8N4V1 131 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 CDYL2Q8N8U2 506 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 OR14L1PQ8NHC6 308 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 ZNF675Q8TD23 568 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 RNF138Q8WVD3 245 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 IFT81Q8WYA0 676 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 KAT2AQ92830 837 aa13.42□□□□□ -0.26
NDE1-203ENST00000570727 BTBD9Q96Q07 612 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms