RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 VSTM2LQ96N03 204 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 ZNF700Q9H0M5 742 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 PCDHAC1Q9H158 963 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 THUMPD1Q9NXG2 353 aaKnown RBP14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 EGFL7Q9UHF1 273 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 IL17BQ9UHF5 180 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 CFL2Q9Y281 166 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 PCDHGA6Q9Y5G7 932 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 SNX13Q9Y5W8 968 aa14.33□□□□□ -0.11
HERPUD1-219ENST00000570273 AKAP13Q12802 2813 aa14.33□□□□□ -0.12
HERPUD1-219ENST00000570273 WDFY3Q8IZQ1 3526 aa14.33□□□□□ -0.12
HERPUD1-219ENST00000570273 IGHV1-45A0A0A0MS14 117 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 TMEM247A6NEH6 219 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ASNA1O43681 348 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 GMNNO75496 209 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ARAFP10398 606 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 COX6A1P12074 109 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 PCGF2P35227 344 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 MAN2A2P49641 1150 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC26A5P58743 744 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 RBBP4Q09028 425 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 IL10RAQ13651 578 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 TRIM25Q14258 630 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ADRM1Q16186 407 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 DUSP5Q16690 384 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ZNF630Q2M218 657 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ATAD3BQ5T9A4 648 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 KIRREL2Q6UWL6 708 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC44A2Q8IWA5 706 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC16A11Q8NCK7 471 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 FAM13CQ8NE31 585 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 NFAM1Q8NET5 270 aaPredicted RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 NFKBIDQ8NI38 313 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ASB9Q96DX5 294 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 VMP1Q96GC9 406 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 LMF2Q9BU23 707 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ITPAQ9BY32 194 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 MUC13Q9H3R2 512 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 TMEM38AQ9H6F2 299 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 A4GALTQ9NPC4 353 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 P2RX2Q9UBL9 471 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 POMPQ9Y244 141 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 DTX4Q9Y2E6 619 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ASPMQ8IZT6 3477 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 DUXAA6NLW8 204 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 OR6C76A6NM76 312 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 C5orf58C9J3I9 102 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 CXCR6O00574 342 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ARPC2O15144 300 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC28A2O43868 658 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 AGR2O95994 175 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 BCHEP06276 602 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 LIFP15018 202 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 NCK1P16333 377 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 GGT1P19440 569 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 CDK6Q00534 326 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SCARB2Q14108 478 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 FLOT2Q14254 428 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 EXOSC6Q5RKV6 272 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 HLA-DQA1Q5Y7H0 255 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC29A4Q7RTT9 530 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 C16orf62Q7Z3J2 963 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 MRGPREQ86SM8 312 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 VASH2Q86V25 355 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 PTRH1Q86Y79 214 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 COX18Q8N8Q8 333 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 GPR151Q8TDV0 419 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 FIG4Q92562 907 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 CDS1Q92903 461 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 SLC35A4Q96G79 324 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 VPS50Q96JG6 964 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 GAL3ST4Q96RP7 486 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 STACQ99469 402 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 TRIM15Q9C019 465 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 PIGUQ9H490 435 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 DUSP22Q9NRW4 184 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 EXD2Q9NVH0 621 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 MAGEL2Q9UJ55 1249 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 PPIEQ9UNP9 301 aaKnown RBP14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 ANGPT4Q9Y264 503 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 KCNE3Q9Y6H6 103 aa14.32□□□□□ -0.12
HERPUD1-219ENST00000570273 NSG1A0A0A6YYJ2 146 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 A0A1W2PQ72 361 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 TTC36A6NLP5 189 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 NKX2-2O95096 273 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 NR2F1P10589 423 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 GABRA3P34903 492 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 GPR143P51810 404 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 CORO7P57737 925 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 HPCAP84074 193 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 MS4A2Q01362 244 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 TRAP1Q12931 704 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 EBPQ15125 230 aaKnown RBP14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 EXT1Q16394 746 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 NNATQ16517 81 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 BTBD16Q32M84 506 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 NPSR1Q6W5P4 371 aa14.31□□□□□ -0.12
HERPUD1-219ENST00000570273 HSDL2Q6YN16 418 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms