RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 FHL5Q5TD97 284 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LRRC66Q68CR7 880 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 NCR3LG1Q68D85 454 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 NADSYN1Q6IA69 706 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DHRS13Q6UX07 377 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PPP1R3BQ86XI6 285 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 KMT5CQ86Y97 462 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CFAP52Q8N1V2 620 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 TRAM1L1Q8N609 369 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ACBD4Q8NC06 268 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ZDHHC1Q8WTX9 485 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CERS2Q96G23 380 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SNRNP25Q9BV90 132 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 PRSS16Q9NQE7 514 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 COPG2Q9UBF2 871 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 HEY2Q9UBP5 337 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GMPPBQ9Y5P6 360 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SNX10Q9Y5X0 201 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SDK1Q7Z5N4 2213 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 TMEM238C9JI98 176 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 HHLA1C9JL84 531 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 NDUFA2O43678 99 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 NUDT17P0C025 328 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LBPP18428 481 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ACVR2AP27037 513 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RPL22P35268 128 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 CEACAM3P40198 252 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CASP3P42574 277 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 KIAA1024LP59773 190 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 UBE2KP61086 200 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ERVK-8P63133 956 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CSHL1Q14406 222 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SPRED3Q2MJR0 410 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 KIF19Q2TAC6 998 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 IQCCQ4KMZ1 466 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ATP13A5Q4VNC0 1218 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PRAMEF8Q5VWM4 474 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RAET1LQ5VY80 246 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 Q6ZS52 159 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PROSER1Q86XN7 944 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 Q8N9G6 341 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 GALNT11Q8NCW6 608 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PSMA8Q8TAA3 256 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SPSB4Q96A44 273 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PFDN5Q99471 154 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ILKAPQ9H0C8 392 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 LIN7BQ9HAP6 207 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SLCO1C1Q9NYB5 712 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PTTG2Q9NZH5 202 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PATJQ8NI35 1801 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CBY3A6NI87 242 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GABRR3A8MPY1 467 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 TCP11X1B4DZS4 312 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 K7ESF4 209 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ZWINTO95229 277 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CRYABP02511 175 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 TPH1P17752 444 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ITIH1P19827 911 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SHMT2P34897 504 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PTPN7P35236 360 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 FOLR3P41439 243 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CFHR1Q03591 330 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 KCNAB1Q14722 419 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LRRC73Q5JTD7 316 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 FBXL22Q6P050 247 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RBM15BQ8NDT2 890 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 BLOC1S5Q8TDH9 187 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DNASE2BQ8WZ79 361 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 FCGR1BQ92637 280 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GTF3AQ92664 365 aaKnown RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 ST6GALNAC6Q969X2 333 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LRR1Q96L50 414 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LRFN5Q96NI6 719 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ALKBH7Q9BT30 221 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 AKIRIN1Q9H9L7 192 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 RNPEPL1Q9HAU8 725 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PLEKHA2Q9HB19 425 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 IL21Q9HBE4 155 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CCNB1IP1Q9NPC3 277 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PAK5Q9P286 719 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 VWA7Q9Y334 891 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 DHRS7Q9Y394 339 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 MYLKQ15746 1914 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GREB1Q4ZG55 1949 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ELOVL7A1L3X0 281 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 C5orf60A6NFR6 353 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 NPIPA2E9PIF3 369 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 LGALS8O00214 317 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ATE1O95260 518 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 ESRRBO95718 433 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 TXNDC12O95881 172 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 PRKCHP24723 683 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 GRK5P34947 590 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 OPRD1P41143 372 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 SLC6A11P48066 632 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 RAB28P51157 221 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 CSNK2A1P68400 391 aaPredicted RBP6.28□□□□□ -1.4
SMG1-217ENST00000569764 SPIBQ01892 262 aa6.28□□□□□ -1.4
SMG1-217ENST00000569764 IRF8Q02556 426 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms