RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 C22orf15Q8WYQ4 148 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 RBM18Q96H35 190 aaKnown RBP5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 NODALQ96S42 347 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 VRK1Q99986 396 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 GATA5Q9BWX5 397 aaPredicted RBP5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 PRRG4Q9BZD6 226 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 PLAC1Q9HBJ0 212 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 LPAR2Q9HBW0 351 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 GALNT9Q9HCQ5 603 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 ANAPC5Q9UJX4 755 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 FBXL2Q9UKC9 423 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 CORINQ9Y5Q5 1042 aa5.79□□□□□ -1.48
HERPUD1-217ENST00000569429 A0A0G2JN53 185 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 C2orf92A0A1B0GVN3 265 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CLPSL1A2RUU4 121 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 J3QLI3 93 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SEC14L5O43304 696 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CST8O60676 142 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ADAP00813 363 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 TFP02787 698 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 OPN1MWP04001 364 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CLPSP04118 112 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 TUBBP07437 444 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 MPC1LP0DKB6 136 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 OPN1MW2P0DN77 364 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 OPN1MW3P0DN78 364 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ENO3P13929 434 aaPredicted RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 DAOP14920 347 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 IFNGR1P15260 489 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SELEP16581 610 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 OMGP23515 440 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CTNNA2P26232 953 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ABCD3P28288 659 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 RBL1P28749 1068 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 AGTR1P30556 359 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 TLX1P31314 330 aaPredicted RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 RPS13P62277 151 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SNRPD2P62316 118 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 HERVK_113P63132 956 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ERVK-8P63133 956 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 PRAMEP78395 509 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ID2Q02363 134 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 BAMBIQ13145 260 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 TFDP2Q14188 446 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SGCBQ16585 318 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SPRED3Q2MJR0 410 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 C2orf68Q2NKX9 166 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 KLHL22Q53GT1 634 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ADNP2Q6IQ32 1131 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 PPP4R4Q6NUP7 873 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 MFSD12Q6NUT3 480 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 C16orf87Q6PH81 154 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 RAD9BQ6WBX8 426 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 DGAT2L6Q6ZPD8 337 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 NUP54Q7Z3B4 507 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 R3HCC1LQ7Z5L2 792 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 P2RY8Q86VZ1 359 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 TDRPQ86YL5 185 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 GBP7Q8N8V2 638 aaPredicted RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 OR4F5Q8NH21 305 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CLDND2Q8NHS1 167 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ANKRD7Q92527 254 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 P3H4Q92791 437 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 HGDQ93099 445 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ADIPOR1Q96A54 375 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 MS4A6EQ96DS6 147 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 FBXO17Q96EF6 278 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 BIRC8Q96P09 236 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 GPA33Q99795 319 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ERVK-6Q9BXR3 956 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 RACGAP1Q9H0H5 632 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SPNS1Q9H2V7 528 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 MYNNQ9NPC7 610 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 CATSPERZQ9NTU4 200 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 GPRC5BQ9NZH0 403 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 KLRF1Q9NZS2 232 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 SLC2A6Q9UGQ3 507 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 LIMA1Q9UHB6 759 aaKnown RBP5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ASIC3Q9UHC3 531 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ZDHHC2Q9UIJ5 367 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 DKKL1Q9UK85 242 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 NENFQ9UMX5 172 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ERVK-19Q9WJR5 959 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ZDHHC9Q9Y397 364 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 ZNF337Q9Y3M9 751 aa5.78□□□□□ -1.48
HERPUD1-217ENST00000569429 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 BTNL10A8MVZ5 291 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 EFCAB8A8MWE9 144 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 H3BMM5 538 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 ERI3O43414 337 aaKnown RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 NIPSNAP2O75323 286 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 PPM1BO75688 479 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 PGM3O95394 542 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 NGFP01138 241 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 GAAP10253 952 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 KRT15P19012 456 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 SAT1P21673 171 aa5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 IDH3GP51553 393 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 DSCR4P56555 118 aaPredicted RBP5.77□□□□□ -1.49
HERPUD1-217ENST00000569429 CLDN20P56880 219 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms