RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GMPRP36959 345 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 KIR2DL2P43627 348 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 RAB10P61026 200 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 SIRPAP78324 504 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 HMGCS1Q01581 520 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 PDIA2Q13087 525 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 FGFBP1Q14512 234 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 FASTKD3Q14CZ7 662 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 ZKSCAN8Q15776 578 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 BCL2A1Q16548 175 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 BEX5Q5H9J7 111 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 TEX9Q8N6V9 391 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 TMCO6Q96DC7 493 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 ZNF845Q96IR2 970 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 OSBPL9Q96SU4 736 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 GPR22Q99680 433 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 HEY2Q9UBP5 337 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 DKKL1Q9UK85 242 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 FBXL2Q9UKC9 423 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 MRPS18CQ9Y3D5 142 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 ANGPTL3Q9Y5C1 460 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 CHD3Q12873 2000 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 ABCA1O95477 2261 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 MED12LQ86YW9 2145 aa10.66□□□□□ -0.7
GTF3C1-209ENST00000568569 OR6C70A6NIJ9 312 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 UBXN8O00124 270 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 EMC8O43402 210 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 TLX2O43763 284 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 UGDHO60701 494 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 SEMA3DO95025 777 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 CGAP01215 116 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 PORP16435 677 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 NR1H2P55055 460 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 VEZF1Q14119 521 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 ETFDHQ16134 617 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 PRICKLE4Q2TBC4 344 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 ZNF704Q6ZNC4 412 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 SH2D5Q6ZV89 423 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 ISCA2Q86U28 154 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 GBP7Q8N8V2 638 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 CDKL2Q92772 493 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 COL21A1Q96P44 957 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 ATOH8Q96SQ7 321 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 RBBP8Q99708 897 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 CPNE1Q99829 537 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 BRINP2Q9C0B6 783 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 SMYD2Q9NRG4 433 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 PSD3Q9NYI0 1048 aa10.65□□□□□ -0.7
GTF3C1-209ENST00000568569 FRG2CA6NGY1 282 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 GOLGA6L10A6NI86 522 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 EFCAB8A8MWE9 144 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 RNF223E7ERA6 249 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 E7ESA3 106 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 FOXE1O00358 373 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 HS3ST1O14792 307 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 TO15178 435 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ZIC3O60481 467 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ABCB7O75027 752 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 SEC31AO94979 1220 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ATP1B1P05026 303 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PEPDP12955 493 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PPP3CBP16298 524 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 TBXA2RP21731 343 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 DRD5P21918 477 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 TCEA1P23193 301 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 DPP4P27487 766 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 GP5P40197 560 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 EEFSECP57772 596 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 MAP4K2Q12851 820 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 EXOSC7Q15024 291 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 CPSF6Q16630 551 aaKnown RBP eCLIP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 CLEC12BQ2HXU8 276 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ANKRD34AQ69YU3 496 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 C22orf34Q6ZV56 151 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 MILR1Q7Z6M3 343 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 HIPK1Q86Z02 1210 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 UBQLNLQ8IYU4 475 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF611Q8N823 705 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF610Q8N9Z0 462 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ADCY4Q8NFM4 1077 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 FIG4Q92562 907 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 TMBIM1Q969X1 311 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 SERPINI1Q99574 410 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 LRRC1Q9BTT6 524 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 KLHL4Q9C0H6 718 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 RNF122Q9H9V4 155 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 NMRAL1Q9HBL8 299 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 MAT2BQ9NZL9 334 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PRODH2Q9UF12 536 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF639Q9UID6 485 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PROCRQ9UNN8 238 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PPP2R2CQ9Y2T4 447 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 PLLPQ9Y342 182 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF175Q9Y473 711 aa10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 RAI1Q7Z5J4 1906 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-209ENST00000568569 SYCE1LA8MT33 242 aa10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 CXorf49A8MYA2 514 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-209ENST00000568569 KLF4O43474 513 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms