RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PAQR8Q8TEZ7 354 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 HSPBAP1Q96EW2 488 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 ZBED6CLQ96FA7 236 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-213ENST00000568158 VSTM2LQ96N03 204 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 PRPF18Q99633 342 aaKnown RBP11.97□□□□□ -0.49
CNOT1-213ENST00000568158 SLX1AQ9BQ83 275 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 DPY30Q9C005 99 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 SH2D2AQ9NP31 389 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 SACM1LQ9NTJ5 587 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 ACSS1Q9NUB1 689 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-213ENST00000568158 NPIPA1Q9UND3 350 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 CHCHD2Q9Y6H1 151 aaPredicted RBP11.97□□□□□ -0.49
CNOT1-213ENST00000568158 USH1CQ9Y6N9 552 aa11.97□□□□□ -0.49
CNOT1-213ENST00000568158 SPENQ96T58 3664 aaKnown RBP11.97□□□□□ -0.49
CNOT1-213ENST00000568158 CAPN14A8MX76 684 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 ANKRD28O15084 1053 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 TO15178 435 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 REM1O75628 298 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 ZIC2O95409 532 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 C6orf47O95873 294 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 KCNK10P57789 538 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 UFM1P61960 85 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 PHC1P78364 1004 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 GAB1Q13480 694 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 BICRALQ6AI39 1079 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 OR4F3Q6IEY1 312 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 OGFOD2Q6N063 350 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 SPATA19Q7Z5L4 167 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 OR2L13Q8N349 312 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 ST6GALNAC3Q8NDV1 305 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 NUP43Q8NFH3 380 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 TMBIM1Q969X1 311 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 OMA1Q96E52 524 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 MAELQ96JY0 434 aaKnown RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 TEX37Q96LM6 180 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 C7orf26Q96N11 449 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 OR52B2Q96RD2 323 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 NODALQ96S42 347 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 DUSP26Q9BV47 211 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 DEFB127Q9H1M4 99 aa11.96□□□□□ -0.49
CNOT1-213ENST00000568158 SIRT3Q9NTG7 399 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 DDX18Q9NVP1 670 aaKnown RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 TUBA8Q9NY65 449 aaPredicted RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 CNOT11Q9UKZ1 510 aaKnown RBP11.96□□□□□ -0.49
CNOT1-213ENST00000568158 GTF3C1Q12789 2109 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 FRG2CA6NGY1 282 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 TP53I11O14683 189 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ACOX3O15254 700 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 EMC8O43402 210 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ASNA1O43681 348 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 HS6ST1O60243 411 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 DIAPH2O60879 1101 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 COQ9O75208 318 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 PPM1BO75688 479 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SLITRK5O94991 958 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 UNC5CO95185 931 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 NAGAP17050 411 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 IL12AP29459 219 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 WNT3P56703 355 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 C21orf58P58505 322 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 PPIAP62937 165 aaKnown RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 PSG6Q00889 435 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 PLGLB1Q02325 96 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SRSF1Q07955 248 aaKnown RBP eCLIP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ZNF155Q12901 538 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ELOAQ14241 798 aaKnown RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 MLC1Q15049 377 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 TMEM198Q66K66 360 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 EPGNQ6UW88 154 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 GFRALQ6UXV0 394 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 NUP54Q7Z3B4 507 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SIAH3Q8IW03 269 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 LRRC34Q8IZ02 419 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SLC34A3Q8N130 599 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ZFP62Q8NB50 900 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 OR52N2Q8NGI0 321 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SPPL2AQ8TCT8 520 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 OR5P2Q8WZ92 322 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 DIO2Q92813 273 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 HGDQ93099 445 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 C16orf58Q96GQ5 468 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 MARK4Q96L34 752 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 MAGEB18Q96M61 343 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 BTBD9Q96Q07 612 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 FAM173AQ9BQD7 235 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 YIPF4Q9BSR8 244 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 BHLHE41Q9C0J9 482 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 CLMPQ9H6B4 373 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 CXorf36Q9H7Y0 433 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 C3orf14Q9HBI5 128 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 EQTNQ9NQ60 294 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 ATAD3AQ9NVI7 634 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 AIG1Q9NVV5 245 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 CNIH4Q9P003 139 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SEC14L3Q9UDX4 400 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 OSGIN2Q9Y236 505 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 GPR45Q9Y5Y3 372 aa11.95□□□□□ -0.5
CNOT1-213ENST00000568158 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.95□□□□□ -0.5
CNOT1-213ENST00000568158 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.94□□□□□ -0.5
CNOT1-213ENST00000568158 GXYLT2A0PJZ3 443 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms