RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PRAF2O60831 178 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 SLC10A3P09131 477 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 NUDT7P0C024 238 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 PKLRP30613 574 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 MAT2AP31153 395 aaKnown RBP11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 TAP2Q03519 686 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 RNF111Q6ZNA4 994 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 USP50Q70EL3 339 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 PRRT2Q7Z6L0 340 aaPredicted RBP11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 ENTHD1Q8IYW4 607 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR7G2Q8NG99 324 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR52P1PQ8NH57 321 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 AMBRA1Q9C0C7 1298 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 RNF167Q9H6Y7 350 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 C5AR2Q9P296 337 aa11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 C14orf166Q9Y224 244 aaKnown RBP11.79□□□□□ -0.52
CSPG4P13-202ENST00000567704 SLC16A5O15375 505 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 ZNF30P17039 623 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 GJA1P17302 382 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CXCR1P25024 350 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CD34P28906 385 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TGFBR1P36897 503 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TBPL1P62380 186 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 GHRHRQ02643 423 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 RASGEF1BQ0VAM2 473 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 SELENBP1Q13228 472 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 C22orf39Q6P5X5 142 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 VASH1Q7L8A9 365 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 NLGN4XQ8N0W4 816 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 FBXO15Q8NCQ5 510 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR51L1Q8NGJ5 315 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TRIB2Q92519 343 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TEX37Q96LM6 180 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 BTNL2Q9UIR0 455 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CICQ96RK0 1608 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 A0A1B0GV50 99 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR2A25A4D2G3 310 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TXNL1O43396 289 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CACNG3O60359 315 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 GJB5O95377 273 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 AMY2AP04746 511 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TUBG1P23258 451 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 RBMXP38159 391 aaKnown RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 DGLUCYQ7Z3D6 616 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 ARHGAP12Q8IWW6 846 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR2T11Q8NH01 316 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 SH3RF2Q8TEC5 729 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 ARL11Q969Q4 196 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TESCQ96BS2 214 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 PGAP3Q96FM1 320 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 SAMD8Q96LT4 415 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 IL17FQ96PD4 163 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 RAD9AQ99638 391 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 ACTR10Q9NZ32 417 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 POLHQ9Y253 713 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 TRAV18A0A075B6X5 111 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 J3KTA2 159 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 EIF1AYO14602 144 aaKnown RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 FRKP42685 505 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 EIF1AXP47813 144 aaKnown RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CBFBQ13951 182 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CTU2Q2VPK5 515 aaKnown RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 PCGF3Q3KNV8 242 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 PRSS58Q8IYP2 241 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 NUP43Q8NFH3 380 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 C16orf78Q8WTQ4 265 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 THAP4Q8WY91 577 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CIDECQ96AQ7 238 aaPredicted RBP11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CNTNAP3BQ96NU0 1288 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 VNN3Q9NY84 501 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 AP1M2Q9Y6Q5 423 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 CCDC88AQ3V6T2 1871 aa11.78□□□□□ -0.52
CSPG4P13-202ENST00000567704 A0A1W2PRU2 124 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 A8MUA0 341 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 AGPAT2O15120 278 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 PIP5K1CO60331 668 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 CD6P30203 668 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 FLT3LGP49771 235 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 WDR5P61964 334 aaKnown RBP11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 IRF5Q13568 498 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 OPCMLQ14982 345 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 ZNF783Q6ZMS7 281 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 Q6ZSR9 355 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 OR2AJ1Q8NGZ0 328 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 SORCS1Q8WY21 1168 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 FBXO8Q9NRD0 319 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 YIPF1Q9Y548 306 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 MTMR11A4FU01 709 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 TTC34A8MYJ7 566 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 AKR1C4P17516 323 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 ARRB2P32121 409 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 AQP6Q13520 282 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 TMEM205Q6UW68 189 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 SH2D5Q6ZV89 423 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 LRRTM4Q86VH4 590 aa11.77□□□□□ -0.52
CSPG4P13-202ENST00000567704 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms