RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 ASB18Q6ZVZ8 466 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 VPS36Q86VN1 386 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SERPINA9Q86WD7 417 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM17Q86X19 198 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 LINC00518Q8N0U6 118 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 CLEC4FQ8N1N0 589 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PYROXD2Q8N2H3 581 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 GPR137CQ8N3F9 429 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SPEM1Q8N4L4 309 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ALLCQ8N6M5 410 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SMRP1Q8NCR6 262 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FAM83FQ8NEG4 500 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SDR9C7Q8NEX9 313 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 OR5AU1Q8NGC0 362 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 OR52N5Q8NH56 324 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SPATA22Q8NHS9 363 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 OLIG1Q8TAK6 271 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 RDH11Q8TC12 318 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ZNF596Q8TC21 504 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 M1APQ8TC57 530 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SCARB1Q8WTV0 552 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SCFD1Q8WVM8 642 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TSEN15Q8WW01 171 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 LIPHQ8WWY8 451 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SMG7Q92540 1137 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PELI1Q96FA3 418 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ABHD8Q96I13 439 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ELMO2Q96JJ3 720 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 AGAP4Q96P64 663 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 CDCA3Q99618 268 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 RIOK1Q9BRS2 568 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 APOOQ9BUR5 198 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 OR2B2Q9GZK3 357 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 DNTTIP1Q9H147 329 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 POLR3FQ9H1D9 316 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 EBF3Q9H4W6 596 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 RGCCQ9H4X1 137 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 AUNIPQ9H7T9 357 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PLAC1Q9HBJ0 212 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 LPAR2Q9HBW0 351 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 APOBEC3GQ9HC16 384 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 UBE2TQ9NPD8 197 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 FGF21Q9NSA1 209 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 MED17Q9NVC6 651 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SMOXQ9NWM0 555 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 SIX4Q9UIU6 781 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PITPNC1Q9UKF7 332 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PILRBQ9UKJ0 227 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 IKZF3Q9UKT9 509 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 GSTK1Q9Y2Q3 226 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 NOSIPQ9Y314 301 aaKnown RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PCDHAC2Q9Y5I4 1007 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 PTGDR2Q9Y5Y4 395 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 TMEM94Q12767 1356 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 KIAA0586Q9BVV6 1533 aa2.98□□□□□ -1.93
HERPUD1-211ENST00000566550 KIAA0556O60303 1618 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TRBV5-5A0A0J9YX44 114 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LOC101059948A0A1B0GTJ6 334 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 RPS10-NUDT3A0A1W2PQS6 291 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 MTMR11A4FU01 709 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LILRA5A6NI73 299 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PROB1E7EW31 1015 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 K7ERQ8 282 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 NBR2O15453 112 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 RGS14O43566 566 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 DUX1O43812 170 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 RANBP6O60518 1105 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 STK17BO94768 372 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SOX30O94993 753 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 FGFR1OPO95684 399 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 GNA14O95837 355 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PGK1P00558 417 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 KRT6AP02538 564 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 GCP02774 474 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SLC35G4P0C7Q5 338 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 STAG3L2P0CL84 134 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 HSMCR30P0CW71 290 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 IGHV4-30-4P0DP06 118 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 POU2F1P14859 743 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 FOSL2P15408 326 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PRKACBP22694 351 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 HMGB2P26583 209 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 BRCC3P46736 316 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 LEPRP48357 1165 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 AMTP48728 403 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 PTH2RP49190 550 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CASP4P49662 377 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CCR4P51679 360 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 SGSHP51688 502 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CDH6P55285 790 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 MYL7Q01449 175 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 OTUD4Q01804 1114 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TFF2Q03403 129 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 GPS2Q13227 327 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 ILKQ13418 452 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 TFDP1Q14186 410 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 MEF2DQ14814 521 aa2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 RBBP5Q15291 538 aaKnown RBP2.97□□□□□ -1.93
HERPUD1-211ENST00000566550 CHRNA6Q15825 494 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms