RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 PYDC1Q8WXC3 89 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ASB9Q96DX5 294 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CERS2Q96G23 380 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 HSFY1Q96LI6 401 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF597Q96LX8 424 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PEBP4Q96S96 227 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 EBF4Q9BQW3 602 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 SNRNP25Q9BV90 132 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 DRC3Q9H069 523 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 PLGRKTQ9HBL7 147 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ARHGEF38Q9NXL2 777 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 BFARQ9NZS9 450 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 RSL24D1Q9UHA3 163 aaKnown RBP3.92□□□□□ -1.78
LINC00561-201ENST00000565815 CYTH4Q9UIA0 394 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF711Q9Y462 761 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 AP4B1Q9Y6B7 739 aa3.92□□□□□ -1.78
LINC00561-201ENST00000565815 COL5A1P20908 1838 aaPredicted RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 A0A087WXM4 84 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 MTMR11A4FU01 709 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 BBIP1A8MTZ0 92 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TXNDC9O14530 226 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PLOD3O60568 738 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TRMUO75648 421 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 HOXB5P09067 269 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 CHATP28329 748 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 GABRA5P31644 462 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 MC5RP33032 325 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 RANBP1P43487 201 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 BRCC3P46736 316 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 HCAR3P49019 387 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PSMD7P51665 324 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 DNAJB13P59910 316 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 HNRNPKP61978 463 aaKnown RBP eCLIP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ZBTB17Q13105 803 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TMED1Q13445 227 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ART3Q13508 389 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PAFAH1B3Q15102 231 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 LINC00299Q6ZSB3 139 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 FAM183BPQ6ZVS7 135 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TRMT1LQ7Z2T5 733 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 LINC00523Q86TU6 105 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM135Q86UB9 458 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 C10orf107Q8IVU9 208 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 KLHDC8BQ8IXV7 354 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 LRRC52Q8N7C0 313 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 POP5Q969H6 163 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 CYP2S1Q96SQ9 504 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SEMA3CQ99985 751 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 C1QTNF7Q9BXJ2 289 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ELOVL4Q9GZR5 314 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SMYD3Q9H7B4 428 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 COG4Q9H9E3 785 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 COMMD8Q9NX08 183 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TMEM9Q9P0T7 183 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 KLHL9Q9P2J3 617 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 AP4S1Q9Y587 144 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 GPR179Q6PRD1 2367 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 IGLV5-52A0A0A0MRZ9 124 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 UBE2CO00762 179 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 CYB561D2O14569 222 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 MID1O15344 667 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PFDN1O60925 122 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 CREG1O75629 220 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 H6PDO95479 791 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 KLF8O95600 359 aaPredicted RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ZBTB11O95625 1053 aaPredicted RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 FCGR1AP12314 374 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 HOXB6P17509 224 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 NCF2P19878 526 aaPredicted RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 TKTL1P51854 596 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ERVPABLB-1P60509 514 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PRAMEP78395 509 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 MRPS34P82930 218 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SQLEQ14534 574 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 NADK2Q4G0N4 442 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 GARNL3Q5VVW2 1013 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 FAM45BPQ6NSW5 357 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 METTL2BQ6P1Q9 378 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 PIWIL4Q7Z3Z4 852 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF554Q86TJ5 538 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 EMC1Q8N766 993 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ZNF441Q8N8Z8 693 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 FAM45AQ8TCE6 357 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SETD7Q8WTS6 366 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 VOPP1Q96AW1 172 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ROPN1LQ96C74 230 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 METTL2AQ96IZ6 378 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SLC25A33Q9BSK2 321 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ANKRD60Q9BZ19 345 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 C20orf27Q9GZN8 174 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 NMRAL1Q9HBL8 299 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 EML4Q9HC35 981 aaKnown RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 C2orf42Q9NWW7 574 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 ANKMY1Q9P2S6 941 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 MARCOQ9UEW3 520 aaPredicted RBP3.91□□□□□ -1.78
LINC00561-201ENST00000565815 SIX4Q9UIU6 781 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 OR2W1Q9Y3N9 320 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 HEY1Q9Y5J3 304 aa3.91□□□□□ -1.78
LINC00561-201ENST00000565815 IGHV1OR15-9A0A0B4J2B8 117 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms