RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	HLX	Q14774	488 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	RBMS3	Q6XE24	437 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF565	Q8N9K5	539 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR5D16	Q8NGK9	328 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM159	Q96B96	161 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MOGAT1	Q96PD6	335 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	HPGDS	O60760	199 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GPX2	P18283	190 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CAPN3	P20807	821 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SPAM1	P38567	509 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CD86	P42081	329 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PAGE3	Q5JUK9	113 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GLT8D1	Q68CQ7	371 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC51A	Q86UW1	340 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MTMR14	Q8NCE2	650 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ASB8	Q9H765	288 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PPP1R3E	Q9H7J1	279 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PNO1	Q9NRX1	252 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	FBXL2	Q9UKC9	423 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PCDHGA2	Q9Y5H1	932 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PRAMEF2	O60811	474 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ACTB	P60709	375 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ACTG1	P63261	375 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	UPP1	Q16831	310 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PRAMEF8	Q5VWM4	474 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PRAMEF7	Q5VXH5	474 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MAVS	Q7Z434	540 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	CNTN4	Q8IWV2	1026 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	BVES	Q8NE79	360 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	FAM96B	Q9Y3D0	163 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	HMX2	A2RU54	273 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SYN3	O14994	580 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GABRB1	P18505	474 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GNMT	Q14749	295 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LAPTM4A	Q15012	233 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ENPP6	Q6UWR7	440 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	DLEU7	Q6UYE1	221 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR137	Q96N19	417 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM39B	Q9GZU3	492 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZFYVE1	Q9HBF4	777 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MAN2C1	Q9NTJ4	1040 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZCWPW2	A0A1B0GU75	182 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ADAMTS3	O15072	1205 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC26A5	P58743	744 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MTFR2	Q6P444	385 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LIMS2	Q7Z4I7	341 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	C10orf53	Q8N6V4	93 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PIH1D1	Q9NWS0	290 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ALDH3B1	P43353	468 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MAP2K6	P52564	334 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	RPL22L1	Q6P5R6	122 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC39A4	Q6P5W5	647 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TMEM107	Q6UX40	140 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PIGZ	Q86VD9	579 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GPR26	Q8NDV2	337 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	UCN3	Q969E3	161 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	HSH2D	Q96JZ2	352 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TMPRSS13	Q9BYE2	586 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	IGSF5	Q9NSI5	407 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	TH	P07101	528 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ABLIM2	Q6H8Q1	611 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SIAH3	Q8IW03	269 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GLB1L2	Q8IW92	636 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	DTX3	Q8N9I9	347 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	BRI3BP	Q8WY22	251 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	APOLD1	Q96LR9	279 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	FCRL4	Q96PJ5	515 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF208	O43345	1280 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	FBP1	P09467	338 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ICAM3	P32942	547 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	HAGH	Q16775	308 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	IL34	Q6ZMJ4	242 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	RNF180	Q86T96	592 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ARFGAP1	Q8N6T3	406 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR6C4	Q8NGE1	309 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR2D3	Q8NGH3	330 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SYT3	Q9BQG1	590 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PXMP2	Q9NR77	195 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	THSD1	Q9NS62	852 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ITGB8	P26012	769 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF41	P51814	821 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	SLC10A2	Q12908	348 aa	Predicted RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	MTAP	Q13126	283 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	GRIN2C	Q14957	1233 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	NKAIN1	Q4KMZ8	207 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PDZD3	Q86UT5	571 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	COMTD1	Q86VU5	262 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	KLHDC1	Q8N7A1	406 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	BPIFC	Q8NFQ6	507 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR14A2	Q96R54	314 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	AARSD1	Q9BTE6	412 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ECI2	O75521	394 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	OR4F21	O95013	312 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	APEX1	P27695	318 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LAP3	P28838	519 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	LASP1	Q14847	261 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	PCSK9	Q8NBP7	692 aa	Known RBP	4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ADAMTS18	Q8TE60	1221 aa		4.05	□□□□□ -1.76
MACF1-231	ENST00000564288	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms