RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 UBQLN3Q9H347 655 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 GALNT9Q9HCQ5 603 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 MIEF1Q9NQG6 463 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 EXO1Q9UQ84 846 aaKnown RBP18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 GPR55Q9Y2T6 319 aaPredicted RBP18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 C15orf41Q9Y2V0 281 aa18.28■□□□□ 0.52
SHCBP1-203ENST00000564272 ABCA12Q86UK0 2595 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM90A27PA6NNH2 459 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 MYO1GB0I1T2 1018 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 GNB5O14775 395 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 TO15178 435 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 BCAS2O75934 225 aaPredicted RBP18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 JUNP05412 331 aaKnown RBP18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 CHRNGP07510 517 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 TACR1P25103 407 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 PTGDSP41222 190 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 NCBP2P52298 156 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 WDR93Q6P2C0 686 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 NPSR1Q6W5P4 371 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 B3GNT6Q6ZMB0 384 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 ACAD11Q709F0 780 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 NUP54Q7Z3B4 507 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 OR2T11Q8NH01 316 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 FAM76AQ8TAV0 307 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 ASB5Q8WWX0 329 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 CAVIN3Q969G5 261 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 NTNG2Q96CW9 530 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 TMEM41AQ96HV5 264 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 VSTM2LQ96N03 204 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 BTBD9Q96Q07 612 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 TTYH2Q9BSA4 534 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 OSBPL11Q9BXB4 747 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 TUBB1Q9H4B7 451 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 FOLH1BQ9HBA9 442 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 ALKBH4Q9NXW9 302 aa18.27■□□□□ 0.52
SHCBP1-203ENST00000564272 C15orf38-AP3S2A0A0A6YYH1 394 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 NKX2-6A6NCS4 301 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 C2orf72A6NCS6 295 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 TMEM233B4DJY2 109 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 SLC28A1O00337 649 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 PLOD3O60568 738 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 WDR1O75083 606 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 SEC22BO75396 215 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 ERN1O75460 977 aaKnown RBP18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 TRAPPC6AO75865 159 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 GLI4P10075 376 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 PRPH2P23942 346 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 CHRNB4P30926 498 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 MPIP34949 423 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 PTGER4P35408 488 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 CDK9P50750 372 aaKnown RBP18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF155Q12901 538 aaPredicted RBP18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 KIAA0040Q15053 153 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 C1orf185Q5T7R7 199 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 KANK2Q63ZY3 851 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 ANGPTL8Q6UXH0 198 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 TCP10LQ8TDR4 215 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 EGLN2Q96KS0 407 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 TRMOQ9BU70 441 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 TRIM8Q9BZR9 551 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 UCK2Q9BZX2 261 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 RUBCNLQ9H714 662 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 LRTM1Q9HBL6 345 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 C1orf109Q9NX04 203 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 KLRF1Q9NZS2 232 aa18.26■□□□□ 0.51
SHCBP1-203ENST00000564272 PRAMEF25A6NGN4 478 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 RGS14O43566 566 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 REM1O75628 298 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 LINC00032P0C843 101 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 CT45A8P0DMV1 189 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 CT45A9P0DMV2 189 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 CREB1P16220 341 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 PTPN6P29350 595 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 NTSP30990 170 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 MC3RP41968 323 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 CT45A2Q5DJT8 189 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 TMEM107Q6UX40 140 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 ZCCHC23Q6ZST2 131 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 IKBIPQ70UQ0 350 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 OR10Q1Q8NGQ4 319 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 LILRB4Q8NHJ6 448 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 GFM2Q969S9 779 aaKnown RBP18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 COL21A1Q96P44 957 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 ROPN1BQ9BZX4 212 aaPredicted RBP18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 ROPN1Q9HAT0 212 aaPredicted RBP18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 SLC6A5Q9Y345 797 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 DNAJC15Q9Y5T4 150 aa18.25■□□□□ 0.51
SHCBP1-203ENST00000564272 NPIPB8E9PQR5 432 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 SNPHO15079 494 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 ZNF500O60304 480 aaPredicted RBP18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 NPHS1O60500 1241 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 ICOSLGO75144 302 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 HPNP05981 417 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 NEFHP12036 1026 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 ADH7P40394 386 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 CRYZQ08257 329 aaKnown RBP18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 TOMM20Q15388 145 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 EIPR1Q53HC9 387 aa18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 ARL13AQ5H913 290 aaPredicted RBP18.24■□□□□ 0.51
SHCBP1-203ENST00000564272 TIGD3Q6B0B8 471 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms