RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 ATP6V1E1P36543 226 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 GIPRP48546 466 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 AP1S2P56377 157 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 RPS26P62854 115 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 TAP2Q03519 686 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SNTB2Q13425 540 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 CAMK1Q14012 370 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 DOC2AQ14183 400 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 GPR33Q49SQ1 333 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 FAM27D1Q5T7N8 215 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 HIST2H2AA3Q6FI13 130 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 TRIM40Q6P9F5 258 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 CERS6Q6ZMG9 384 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 OAFQ86UD1 273 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 MON1AQ86VX9 555 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 KLBQ86Z14 1044 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 OR52N2Q8NGI0 321 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SLC22A8Q8TCC7 542 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 AHCYL2Q96HN2 611 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 WRAP53Q9BUR4 548 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 POLDIP3Q9BY77 421 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 MGAT4CQ9UBM8 478 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 TNS1Q9HBL0 1735 aaKnown RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 ARRDC5A6NEK1 342 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 F8W810 466 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 ARPC5O15511 151 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SOX30O94993 753 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SLC25A27O95847 323 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SMIM10L2AP0DMW4 78 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SMIM10L2BP0DMW5 78 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 RECQLP46063 649 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 HAAOP46952 286 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 S100A12P80511 92 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SIM1P81133 766 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 MC1RQ01726 317 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 RAB40BQ12829 278 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 PIN1Q13526 163 aaPredicted RBP11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 MELKQ14680 651 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 LTB4RQ15722 352 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 ALG1LQ6GMV1 187 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 TCTN3Q6NUS6 607 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 TMEM88Q6PEY1 159 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 HMGB4Q8WW32 186 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 UPF1Q92900 1129 aaKnown RBP eCLIP11.66□□□□□ -0.541e-10■■■■□ 24.4
SCAMP2-204ENST00000563829 RDH14Q9HBH5 336 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 KLHL1Q9NR64 748 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 SLC39A1Q9NY26 324 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 MARCH2Q9P0N8 246 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 RPS6KB2Q9UBS0 482 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 ANGPT4Q9Y264 503 aa11.66□□□□□ -0.54
SCAMP2-204ENST00000563829 H7C0S8 307 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SELENOFO60613 162 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 CD22P20273 847 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SHC1P29353 583 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 RBMS1P29558 406 aaKnown RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 GRK4P32298 578 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SLC1A3P43003 542 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 MEOX2P50222 304 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 GAS1P54826 345 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SEMG2Q02383 582 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 GGTA1PQ4G0N0 100 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 KIAA1161Q6NSJ0 714 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ESPNLQ6ZVH7 1005 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 TRMT11Q7Z4G4 463 aaKnown RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 L3MBTL4Q8NA19 623 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 IL17RCQ8NAC3 791 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 GPR26Q8NDV2 337 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 WDR20Q8TBZ3 569 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ACOT12Q8WYK0 555 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 MRPS24Q96EL2 167 aaKnown RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 WFDC6Q9BQY6 131 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 OR10A4Q9H209 315 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 EDARQ9UNE0 448 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 DRGXA6NNA5 263 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ABCD4O14678 606 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SDC3O75056 442 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 FZD7O75084 574 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 CH25HO95992 272 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 WNT1P04628 370 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 EPHX1P07099 455 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 FOSL1P15407 271 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 HLA-FP30511 346 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 VEGFCP49767 419 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 VGLL4Q14135 290 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 CLEC12AQ5QGZ9 265 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 NCEH1Q6PIU2 408 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 PRSS45Q7RTY3 260 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 LRRC70Q7Z2Q7 622 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 PDZD9Q8IXQ8 264 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 KCT2Q8NC54 265 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 OR6K2Q8NGY2 324 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ZDHHC1Q8WTX9 485 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 SPRYD4Q8WW59 207 aaPredicted RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ASZ1Q8WWH4 475 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 CHFRQ96EP1 664 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 ARL6Q9H0F7 186 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 C20orf85Q9H1P6 137 aa11.65□□□□□ -0.54
SCAMP2-204ENST00000563829 CA10Q9NS85 328 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms