RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 ADOQ96SZ5 270 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 SECISBP2Q96T21 854 aaKnown RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 SMR3AQ99954 134 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 FOXC2Q99958 501 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 MRPL57Q9BQC6 102 aaKnown RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 EBPLQ9BY08 206 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 ACPTQ9BZG2 426 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 RTN4RQ9BZR6 473 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 CXXC4Q9H2H0 198 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 MRPL46Q9H2W6 279 aaKnown RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 AHSPQ9NZD4 102 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 FLRT3Q9NZU0 649 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 ZNF629Q9UEG4 869 aaPredicted RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 UTS2RQ9UKP6 389 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 DLGAP4Q9Y2H0 992 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 RPH3AQ9Y2J0 694 aaPredicted RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 GPR55Q9Y2T6 319 aaPredicted RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 TIMM22Q9Y584 194 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 PCDHGB3Q9Y5G1 929 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 IKBKGQ9Y6K9 419 aa6.28□□□□□ -1.4
CDH11-208ENST00000563492 HRNRQ86YZ3 2850 aaPredicted RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 PHF3Q92576 2039 aaKnown RBP6.28□□□□□ -1.4
CDH11-208ENST00000563492 ZNF469Q96JG9 3925 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 MBD3L4A6NDZ8 208 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 MBD3L3A6NE82 208 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 PRAMEF25A6NGN4 478 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TUBAL3A6NHL2 446 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 GOLGA6L10A6NI86 522 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 MBD3L5A6NJ08 208 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 CLCA1A8K7I4 914 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 UBFD1O14562 309 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 ZIC3O60481 467 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 REM1O75628 298 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 SUPT7LO94864 414 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 ESRRBO95718 433 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TGM6O95932 706 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 OTCP00480 354 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 FAM153BP0C7A2 387 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TMIGD3P0DMS9 266 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 COL6A2P12110 1019 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 CPN1P15169 458 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 NAGAP17050 411 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 HOXB4P17483 251 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 KRT15P19012 456 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 DRD5P21918 477 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 CTSSP25774 331 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 PPICP45877 212 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TMED10P49755 219 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 SERPINB9P50453 376 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 DGKQP52824 942 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 FOXA1P55317 472 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 GFRA1P56159 465 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 CLDN15P56746 228 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 B3GALT5-AS1P59052 145 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 ADAM8P78325 824 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 CKAP4Q07065 602 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 DAZAP2Q15038 168 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 TSNAXIP1Q2TAA8 658 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 FAM153CQ494X1 144 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 ZNF678Q5SXM1 525 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 Q71RC1 249 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 TGIF2LYQ8IUE0 185 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 C17orf47Q8NEP4 570 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 WFDC11Q8NEX6 87 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 OR7G2Q8NG99 324 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 OR5M1Q8NGP8 315 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 OR14L1PQ8NHC6 308 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 MBD3L2Q8NHZ7 208 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 METTL6Q8TCB7 284 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 C16orf78Q8WTQ4 265 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 FAM222BQ8WU58 562 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 EFHD2Q96C19 240 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 INTS12Q96CB8 462 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 RMND5BQ96G75 393 aaPredicted RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 VSTM2LQ96N03 204 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 OSBPL11Q9BXB4 747 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 C1QTNF3Q9BXJ4 246 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 C12orf65Q9H3J6 166 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 PLEKHF2Q9H8W4 249 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TNFRSF12AQ9NP84 129 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 PFDN4Q9NQP4 134 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TAS2R10Q9NYW0 307 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 KLRF1Q9NZS2 232 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 JKAMPQ9P055 326 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 MTRF1LQ9UGC7 380 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 FETUBQ9UGM5 382 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 TRPS1Q9UHF7 1281 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 NFU1Q9UMS0 254 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 SNX6Q9UNH7 406 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 EXO1Q9UQ84 846 aaKnown RBP6.27□□□□□ -1.41
CDH11-208ENST00000563492 MPDZO75970 2070 aa6.27□□□□□ -1.41
CDH11-208ENST00000563492 NAV3Q8IVL0 2385 aa6.26□□□□□ -1.41
CDH11-208ENST00000563492 NIPBLQ6KC79 2804 aaeCLIP6.26□□□□□ -1.41
CDH11-208ENST00000563492 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.26□□□□□ -1.41
CDH11-208ENST00000563492 GNG14A0A1W2PPG7 69 aa6.26□□□□□ -1.41
CDH11-208ENST00000563492 A0A1W2PPM1 405 aa6.26□□□□□ -1.41
CDH11-208ENST00000563492 FRG2CA6NGY1 282 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms