RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CHODLQ9H9P2 273 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 CXorf21Q9HAI6 301 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 EML4Q9HC35 981 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 IARS2Q9NSE4 1012 aaKnown RBP6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 GPRC5BQ9NZH0 403 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 KCNS2Q9ULS6 477 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 GPR52Q9Y2T5 361 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 ZNF175Q9Y473 711 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 OARD1Q9Y530 152 aa6.9□□□□□ -1.3
HERPUD1-206ENST00000563343 PABPN1LA6NDY0 278 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 DPRXA6NFQ7 191 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 PRAMEF25A6NGN4 478 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 VWC2LB2RUY7 222 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SHISA9B4DS77 424 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 TAPBPO15533 448 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 VENTXO95231 258 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 TGFB1P01137 390 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 TPM3P06753 285 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CD3EP07766 207 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SLC35E2BP0CK96 405 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SLC35E2P0CK97 266 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 MLNP12872 115 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 PEPDP12955 493 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF37AP17032 561 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 PTNP21246 168 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CASP2P42575 452 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SLC6A8P48029 635 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 GZMKP49863 264 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 HNMTP50135 292 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 GAS1P54826 345 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 NAP1L1P55209 391 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CLDN20P56880 219 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 DSCR9P59020 149 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 DOC2AQ14183 400 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SPA17Q15506 151 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 NNATQ16517 81 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CCNG2Q16589 344 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CTU2Q2VPK5 515 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 OR4C11Q6IEV9 310 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 MRM1Q6IN84 353 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM166AQ6J272 317 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CAVIN1Q6NZI2 390 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 CLEC2AQ6UVW9 174 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 GPR180Q86V85 440 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 UBQLNLQ8IYU4 475 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SEMA6DQ8NFY4 1073 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 PROX1Q92786 737 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 S100PBPQ96BU1 408 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 HBEGFQ99075 208 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 FAM167BQ9BTA0 163 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 ZNF717Q9BY31 904 aaPredicted RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 OR10A5Q9H207 317 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 MS4A12Q9NXJ0 267 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 KLRF1Q9NZS2 232 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 SLC17A6Q9P2U8 582 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 ASB4Q9Y574 426 aa6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 HEATR1Q9H583 2144 aaKnown RBP6.89□□□□□ -1.31
HERPUD1-206ENST00000563343 NBEAL2Q6ZNJ1 2754 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 A0A1W2PR48 441 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 GLOD5A6NK44 160 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 SAP18O00422 153 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 PLPP1O14494 284 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TMPRSS11DO60235 418 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 RAMP1O60894 148 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 SS18L1O75177 396 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 SH3BGRLO75368 114 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 GCM2O75603 506 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 KRT15P19012 456 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 USF1P22415 310 aaPredicted RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TCEA1P23193 301 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ADH6P28332 368 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 GGT5P36269 586 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 SSR2P43308 183 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 KCNJ1P48048 391 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TERF1P54274 439 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 DEFA6Q01524 100 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 BSPH1Q075Z2 132 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 KIF5AQ12840 1032 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TSC22D1Q15714 1073 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TAB1Q15750 504 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 AP5B1Q2VPB7 878 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 TMEM35AQ53FP2 167 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 PRR31Q5SQ13 230 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 DEPDC1Q5TB30 811 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 KHDRBS2Q5VWX1 349 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 HLA-DQA1Q5Y7H0 255 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 HIST2H2BDQ6DRA6 164 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 OR5M10Q6IEU7 315 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 BEND4Q6ZU67 534 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CHMP1BQ7LBR1 199 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 GALNT7Q86SF2 657 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 GPSM1Q86YR5 675 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 CNTN4Q8IWV2 1026 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 ZCCHC7Q8N3Z6 543 aaKnown RBP6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 RNF175Q8N4F7 328 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 METTL25Q8N6Q8 603 aa6.88□□□□□ -1.31
HERPUD1-206ENST00000563343 PIWIL2Q8TC59 973 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms