RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CAMKMTQ7Z624 323 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 CHERPQ8IWX8 916 aaKnown RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 TAGAPQ8N103 731 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 ST6GALNAC3Q8NDV1 305 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 OR2M7Q8NG81 312 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 OR4N2Q8NGD1 307 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 PSMA8Q8TAA3 256 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 PIWIL2Q8TC59 973 aaKnown RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 CKAP2Q8WWK9 683 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 HOXB13Q92826 284 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 HGDQ93099 445 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 TMEM125Q96AQ2 219 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 GIMAP5Q96F15 307 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 TEX37Q96LM6 180 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 C7orf26Q96N11 449 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 OR52B2Q96RD2 323 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 PRODH2Q9UF12 536 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 VPS4AQ9UN37 437 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 CFL2Q9Y281 166 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 KLF13Q9Y2Y9 288 aaPredicted RBP7.86□□□□□ -1.15
UBR1-204ENST00000563239 NPFFR2Q9Y5X5 522 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 CROCCQ5TZA2 2017 aa7.86□□□□□ -1.15
UBR1-204ENST00000563239 ANKUB1A6NFN9 424 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 TRPC5OSA6NMA1 111 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 SLCO1B7G3V0H7 640 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 KLRC4-KLRK1H3BQV0 150 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ADAM10O14672 748 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ACOX3O15254 700 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 TSPAN2O60636 221 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 UGT2B11O75310 529 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ERN1O75460 977 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 PPM1BO75688 479 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 NAGAP17050 411 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 IL12AP29459 219 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 PIGAP37287 484 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 RPL3P39023 403 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 DNASE1L1P49184 302 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 MANFP55145 182 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 KCNK10P57789 538 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 DCAF7P61962 342 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 PSG6Q00889 435 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 KCNC4Q03721 635 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 EIF2S3LQ2VIR3 472 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 CPTPQ5TA50 214 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 HLA-DQA1Q5Y7H0 255 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 SLC22A10Q63ZE4 541 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 TMEM198Q66K66 360 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 BICRALQ6AI39 1079 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 EPGNQ6UW88 154 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 RGS9BPQ6ZS82 235 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 WDR53Q7Z5U6 358 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 FGD2Q7Z6J4 655 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ATCAYQ86WG3 371 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 DND1Q8IYX4 353 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 FBXW8Q8N3Y1 598 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 GOLGA6L1Q8N7Z2 621 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 POGLUT1Q8NBL1 392 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 OR5M3Q8NGP4 307 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 SPPL2AQ8TCT8 520 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 LRRC8CQ8TDW0 803 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ACTRT2Q8TDY3 377 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 RNF138Q8WVD3 245 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 OMA1Q96E52 524 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 HSPBAP1Q96EW2 488 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 ZBED6CLQ96FA7 236 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 MAGED4Q96JG8 741 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 GPR137Q96N19 417 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 NODALQ96S42 347 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 LMF2Q9BU23 707 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 BHLHE41Q9C0J9 482 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 TSPAN10Q9H1Z9 355 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 CXorf36Q9H7Y0 433 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 SLC24A3Q9HC58 644 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 SACM1LQ9NTJ5 587 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 INTS9Q9NV88 658 aaKnown RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 AIG1Q9NVV5 245 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 TUBA8Q9NY65 449 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 TAS2R9Q9NYW1 312 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 GPR45Q9Y5Y3 372 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 USH1CQ9Y6N9 552 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 LRRK2Q5S007 2527 aa7.85□□□□□ -1.15
UBR1-204ENST00000563239 RP1L1Q8IWN7 2480 aaPredicted RBP7.85□□□□□ -1.15
UBR1-204ENST00000563239 EXPH5Q8NEV8 1989 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 POLEQ07864 2286 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 A0A1W2PRB8 838 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ANKRD33BA6NCL7 494 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 LRRC3CA6NJW4 275 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 NPIPA5E9PKD4 350 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ZNHIT1O43257 154 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 COQ9O75208 318 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 TRIM3O75382 744 aaPredicted RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 C6orf47O95873 294 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 P04436 131 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 RFPL3SP0C7P2 107 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 PTGDSP41222 190 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 CASP3P42574 277 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ZFP36L2P47974 494 aaKnown RBP7.84□□□□□ -1.15
UBR1-204ENST00000563239 NME5P56597 212 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 UFM1P61960 85 aa7.84□□□□□ -1.15
UBR1-204ENST00000563239 ALDH6A1Q02252 535 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms