RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 SERPINB7O75635 380 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 ETS2P15036 469 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 MAP3K8P41279 467 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PDX1P52945 283 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 DAG1Q14118 895 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PHF19Q5T6S3 580 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PRAMEF8Q5VWM4 474 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PRAMEF7Q5VXH5 474 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 C16orf62Q7Z3J2 963 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 COMTD1Q86VU5 262 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 SLC38A9Q8NBW4 561 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PTCHD1Q96NR3 888 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 OR1F2PQ96R84 312 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF300Q96RE9 604 aaPredicted RBP16.83■□□□□ 0.28
COMMD4-208ENST00000563220 WFDC6Q9BQY6 131 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 QRSL1Q9H0R6 528 aaKnown RBP16.83■□□□□ 0.28
COMMD4-208ENST00000563220 PIGUQ9H490 435 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 THSD1Q9NS62 852 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 EXD2Q9NVH0 621 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 WDR87Q6ZQQ6 2873 aa16.83■□□□□ 0.28
COMMD4-208ENST00000563220 D6RAR5 112 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 J3KTA2 159 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 DPM1O60762 260 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ALPLP05186 524 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 FBLP22087 321 aaKnown RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ALDH3A2P51648 485 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 EFNA3P52797 238 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 GK3PQ14409 553 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 LAPTM4AQ15012 233 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 CLPPQ16740 277 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 VWA2Q5GFL6 755 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 MLIPQ5VWP3 458 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 RHBDD2Q6NTF9 364 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ZCCHC12Q6PEW1 402 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SHQ1Q6PI26 577 aaKnown RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 B3GNT8Q7Z7M8 397 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 KRT73Q86Y46 540 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 CDRT4Q8N9R6 151 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 RHBDD1Q8TEB9 315 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 BTBD2Q9BX70 525 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 OSBPL10Q9BXB5 764 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 OCIAD1Q9NX40 245 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SEC16AO15027 2179 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ADAMTS20P59510 1910 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 DSPPQ9NZW4 1301 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 AHCYL1O43865 530 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 EPPINO95925 133 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 AGR2O95994 175 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SSTR4P31391 388 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 DNAJA1P31689 397 aaKnown RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 MAPK10P53779 464 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 PPP2R2BQ00005 443 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF267Q14586 743 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ARHGAP11BQ3KRB8 267 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ARHGAP40Q5TG30 622 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 PWWP2BQ6NUJ5 590 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 HIPK1Q86Z02 1210 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 MARVELD2Q8N4S9 558 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 OR4D11Q8NGI4 311 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 TFAP2CQ92754 450 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SDCCAG3Q96C92 435 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF354BQ96LW1 612 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 Q9H521 79 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 APMAPQ9HDC9 416 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SLC22A11Q9NSA0 550 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 UBAP1Q9NZ09 502 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 RARRES3Q9UL19 164 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 SAMHD1Q9Y3Z3 626 aaKnown RBP16.82■□□□□ 0.28
COMMD4-208ENST00000563220 MMACHCQ9Y4U1 282 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 PCDHGB5Q9Y5G0 923 aa16.82■□□□□ 0.28
COMMD4-208ENST00000563220 CDX4O14627 284 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-208ENST00000563220 SNAP29O95721 258 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 IFNA16P05015 189 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 ALOX5P09917 674 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 FPR1P21462 350 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 FUT4P22083 530 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 ACP1P24666 158 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 RRM2P31350 389 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 EMDP50402 254 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 KCNC4Q03721 635 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 ZFP36L1Q07352 338 aaKnown RBP16.81■□□□□ 0.28
COMMD4-208ENST00000563220 SERTAD2Q14140 314 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 PDK3Q15120 406 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 SF3A2Q15428 464 aaKnown RBP16.81■□□□□ 0.28
COMMD4-208ENST00000563220 CCNJQ5T5M9 372 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 RNF220Q5VTB9 566 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 FRRS1Q6ZNA5 592 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 RASSF5Q8WWW0 418 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 PIK3R3Q92569 461 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 PROX1Q92786 737 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 HOXB13Q92826 284 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-208ENST00000563220 TSLPQ969D9 159 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 ZNF347Q96SE7 839 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 TSC22D3Q99576 134 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 REEP1Q9H902 201 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 DUSP22Q9NRW4 184 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 SMPD3Q9NY59 655 aaPredicted RBP16.81■□□□□ 0.28
COMMD4-208ENST00000563220 CALML5Q9NZT1 146 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 SRPK3Q9UPE1 567 aa16.81■□□□□ 0.28
COMMD4-208ENST00000563220 TESMINQ9Y4I5 508 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms