RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 PGBD2Q6P3X8 592 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 CD300LDQ6UXZ3 194 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 PRSS41Q7RTY9 318 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 COMTD1Q86VU5 262 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 RBM45Q8IUH3 476 aaKnown RBP11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 DNAJC22Q8N4W6 341 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 ZNF540Q8NDQ6 660 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 FAR1Q8WVX9 515 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 FCGR1BQ92637 280 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 RORBQ92753 470 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 MYDGFQ969H8 173 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 CLDN23Q96B33 292 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 SLC35A4Q96G79 324 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 SIGLEC11Q96RL6 698 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 STACQ99469 402 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 SLC38A3Q99624 504 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 FNDC11Q9BVV2 318 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 CCDC90BQ9GZT6 254 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 CHRNA10Q9GZZ6 450 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 PIGUQ9H490 435 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 SLC24A3Q9HC58 644 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 RASSF1Q9NS23 344 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 PCDHGA10Q9Y5H3 936 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 KCNE3Q9Y6H6 103 aa11.84□□□□□ -0.51
AC055717.2-201ENST00000561864 C5orf42Q9H799 3197 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 SH3D21A4FU49 640 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 SLC9B1P1A6NJY1 282 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 LMO7DNF2Z398 122 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 AQP9O43315 295 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 FGF17O60258 216 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 OR10H3O60404 316 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 DNAJB6O75190 326 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 MT-ND2P03891 347 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 THBS1P07996 1170 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ALOX5P09917 674 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 NT5EP21589 574 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 CHMP24386 653 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 IFNA8P32881 189 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 PDX1P52945 283 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ALDH6A1Q02252 535 aaKnown RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 EMX1Q04741 257 aaPredicted RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 PIGFQ07326 219 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 COX10Q12887 443 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ILKQ13418 452 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 SEC23BQ15437 767 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 EIPR1Q53HC9 387 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 GARNL3Q5VVW2 1013 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 SLX4IPQ5VYV7 408 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 OGFOD3Q6PK18 319 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 Q6ZPB1 254 aaPredicted RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ZNF438Q7Z4V0 828 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 OR4N5Q8IXE1 308 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 SIX5Q8N196 739 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 DEFB119Q8N690 84 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 CDRT4Q8N9R6 151 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 OR6T1Q8NGN1 323 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 PMM1Q92871 262 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 CDS1Q92903 461 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 COL26A1Q96A83 441 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 HSPA12BQ96MM6 686 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ZNF285Q96NJ3 590 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 CD180Q99467 661 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 IER2Q9BTL4 223 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 POLR2J2Q9GZM3 115 aaKnown RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 RAB33BQ9H082 229 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 POLR2J3Q9H1A7 115 aaKnown RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 EVA1AQ9H8M9 152 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 MTHFD2LQ9H903 347 aaPredicted RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 GPN2Q9H9Y4 310 aaPredicted RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 FAM60AQ9NP50 221 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 POLE3Q9NRF9 147 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 DUSP22Q9NRW4 184 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 TMEM74BQ9NUR3 256 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 FKBP14Q9NWM8 211 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ZNF226Q9NYT6 803 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 MAT2BQ9NZL9 334 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 REV1Q9UBZ9 1251 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 NDOR1Q9UHB4 597 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 PSORS1C1Q9UIG5 152 aa11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 ZNF443Q9Y2A4 671 aaPredicted RBP11.83□□□□□ -0.52
AC055717.2-201ENST00000561864 TLCD2A6NGC4 264 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 SGK494L7N484 410 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 COQ9O75208 318 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 NME6O75414 186 aaPredicted RBP11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 RDH16O75452 317 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 GUSBP08236 651 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 SLC35E2P0CK97 266 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 RNH1P13489 461 aaKnown RBP11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 CCNA2P20248 432 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 GSTM3P21266 225 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 FUT4P22083 530 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 IFNGR2P38484 337 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 IDH2P48735 452 aaKnown RBP11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 GP2P55259 537 aaKnown RBP11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 TAS2R41P59536 307 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 MGAT2Q10469 447 aa11.82□□□□□ -0.52
AC055717.2-201ENST00000561864 TRAM2Q15035 370 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms