RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 LHX9Q9NQ69 397 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 ZCCHC3Q9NUD5 404 aaKnown RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 OTOL1A6NHN0 477 aaPredicted RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 C1QTNF3-AMACRE9PGA6 284 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 CSO75390 466 aaKnown RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 STATHP02808 62 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 ERGP11308 486 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 PSMA1P25786 263 aaKnown RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 TNFSF8P32971 234 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 EVI2BP34910 448 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 PRKAG1P54619 331 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 CDK3Q00526 305 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF91Q05481 1191 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 FAM46CQ5VWP2 391 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 OLIG3Q7RTU3 272 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 WDR53Q7Z5U6 358 aaPredicted RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 AMER3Q8N944 861 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 COX14Q96I36 57 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 FNDC11Q9BVV2 318 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 MND1Q9BWT6 205 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 POLR2J2Q9GZM3 115 aaKnown RBP10.35□□□□□ -0.75
NEIL1-202ENST00000561643 OSGEPL1Q9H4B0 414 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 HSPB11Q9Y547 144 aa10.35□□□□□ -0.75
NEIL1-202ENST00000561643 MYL12BO14950 172 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NFATC1O95644 943 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 EPHX1P07099 455 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 GSTM5P46439 218 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 ALDH6A1Q02252 535 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 DBPQ10586 325 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CLVS2Q5SYC1 327 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 METRNLQ641Q3 311 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 C12orf73Q69YU5 71 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 ADAMTSL4Q6UY14 1074 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 OR9Q1Q8NGQ5 310 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 DPH7Q9BTV6 452 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 MVB12BQ9H7P6 319 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 IL23AQ9NPF7 189 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 FZD3Q9NPG1 666 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CXXC1Q9P0U4 656 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 KIAA1549LQ6ZVL6 1849 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NUMA1Q14980 2115 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 A0A0B4J293 547 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 A0A1W2PQ09 198 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 TBC1D3BA6NDS4 549 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 IGLON5A6NGN9 336 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 GLOD5A6NK44 160 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PPM1DO15297 605 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 TLX2O43763 284 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 LCMT2O60294 686 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 OR2B3O76000 313 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SLITRK5O94991 958 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PCDH8O95206 1070 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF250P15622 560 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PTGER1P34995 402 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 FRKP42685 505 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 C1DQ13901 141 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NCF4Q15080 339 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 OR4C11Q6IEV9 310 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PODNL1Q6PEZ8 512 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 LILRB2Q8N423 598 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 RAB42Q8N4Z0 105 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 OR4M2Q8NGB6 313 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PCNPQ8WW12 178 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 RNF31Q96EP0 1072 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 BBS4Q96RK4 519 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 YIPF4Q9BSR8 244 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 GLIPR2Q9H4G4 154 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SCPEP1Q9HB40 452 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SMURF1Q9HCE7 757 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CTPS2Q9NRF8 586 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 ACSS1Q9NUB1 689 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 GLTPQ9NZD2 209 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SLC9A8Q9Y2E8 581 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 PRAMEF27A3QJZ7 478 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CCDC182A6NF36 153 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 WASHC1A8K0Z3 465 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 I3L521 148 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CD72P21854 359 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NCBP2P52298 156 aaKnown RBP eCLIP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 ZNF267Q14586 743 aaPredicted RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 TMEM201Q5SNT2 666 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NDUFAF5Q5TEU4 345 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 WASH2PQ6VEQ5 465 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 UBE3DQ7Z6J8 389 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 TRMT61AQ96FX7 289 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 TM9SF2Q99805 663 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 CCDC32Q9BV29 185 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SNTG1Q9NSN8 517 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 SEC14L4Q9UDX3 406 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NDOR1Q9UHB4 597 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 NUP50Q9UKX7 468 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 A4GNTQ9UNA3 340 aa10.34□□□□□ -0.75
NEIL1-202ENST00000561643 LSM2Q9Y333 95 aaKnown RBP10.34□□□□□ -0.75
NEIL1-202ENST00000561643 A0A1W2PPV9 198 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ANTXRLA6NF34 631 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 WWP2O00308 870 aa10.33□□□□□ -0.76
NEIL1-202ENST00000561643 PRKRAO75569 313 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 ERAL1O75616 437 aaKnown RBP10.33□□□□□ -0.76
NEIL1-202ENST00000561643 FGBP02675 491 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms