RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 QSOX2Q6ZRP7 698 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CYP4Z1Q86W10 505 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 METTL27Q8N6F8 245 aaPredicted RBP15.98■□□□□ 0.15
HDDC3-206ENST00000561036 SLC9A6Q92581 669 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CDS1Q92903 461 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 CNBD2Q96M20 576 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 GFM1Q96RP9 751 aaKnown RBP15.98■□□□□ 0.15
HDDC3-206ENST00000561036 AMBRA1Q9C0C7 1298 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 BATF3Q9NR55 127 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 POLE3Q9NRF9 147 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 SLC9A8Q9Y2E8 581 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 U3KQV3 271 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 ZDBF2Q9HCK1 2354 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 ADAMTS20P59510 1910 aa15.98■□□□□ 0.15
HDDC3-206ENST00000561036 MYOCOSA0A1B0GUC4 107 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 PRAMEF25A6NGN4 478 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 A8MVJ9 347 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 DIRAS1O95057 198 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 NKX2-2O95096 273 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 LGI1O95970 557 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 RECKO95980 971 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 ALPPP05187 535 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 GP1BAP07359 652 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 LYNP07948 512 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 TNFRSF1BP20333 461 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 RRM2P31350 389 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 OR1D4P47884 311 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 BTG2P78543 158 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 ADARB1P78563 741 aaKnown RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 BLMHQ13867 455 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 ERV3-1Q14264 604 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 PUM1Q14671 1186 aaKnown RBP eCLIP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 DHRS4L2Q6PKH6 230 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 ZNF605Q86T29 641 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 OR7G1Q8NGA0 311 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 OTUB1Q96FW1 271 aaPredicted RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 LMF2Q9BU23 707 aaKnown RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 SAP130Q9H0E3 1048 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 SMURF2Q9HAU4 748 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 CACYBPQ9HB71 228 aaKnown RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 MKKSQ9NPJ1 570 aaPredicted RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 UBAP1Q9NZ09 502 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 DHCR7Q9UBM7 475 aaKnown RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 C3orf18Q9UK00 162 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 IFT52Q9Y366 437 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 MAGED1Q9Y5V3 778 aaPredicted RBP15.97■□□□□ 0.15
HDDC3-206ENST00000561036 MAU2Q9Y6X3 613 aa15.97■□□□□ 0.15
HDDC3-206ENST00000561036 TNFRSF11BO00300 401 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 FLRT2O43155 660 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 PRAMEF2O60811 474 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SNAP29O95721 258 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 LDOC1O95751 146 aaPredicted RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 HBQ1P09105 142 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 PABPC4LP0CB38 370 aaKnown RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 MAOAP21397 527 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 PRKAR1BP31321 381 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SMIM11AP58511 58 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 CHRNEQ04844 493 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 FUT7Q11130 342 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 EXOSC7Q15024 291 aaKnown RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 ZNHIT3Q15649 155 aaPredicted RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 ARHGAP40Q5TG30 622 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 TTC23Q5W5X9 447 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 LAIR1Q6GTX8 287 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 FAHD1Q6P587 224 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 DGAT2L6Q6ZPD8 337 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SLITRK4Q8IW52 837 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 HS3ST5Q8IZT8 346 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 COX18Q8N8Q8 333 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SIMC1Q8NDZ2 872 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 OR52R1Q8NGF1 315 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 OR4C15Q8NGM1 316 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 CYGBQ8WWM9 190 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 NR4A3Q92570 626 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 CNDP2Q96KP4 475 aaKnown RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SDF2Q99470 211 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 PSD2Q9BQI7 771 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 YIPF2Q9BWQ6 316 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 ZNF350Q9GZX5 532 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SIDT1Q9NXL6 827 aaKnown RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 PDP1Q9P0J1 537 aaPredicted RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 SCOCQ9UIL1 159 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 KCND3Q9UK17 655 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 RARRES3Q9UL19 164 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 ZNF232Q9UNY5 417 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 HEMK1Q9Y5R4 338 aaPredicted RBP15.96■□□□□ 0.15
HDDC3-206ENST00000561036 LYVE1Q9Y5Y7 322 aa15.96■□□□□ 0.15
HDDC3-206ENST00000561036 UNC13CQ8NB66 2214 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 RP1P56715 2156 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 IGKV3D-11A0A0A0MRZ8 115 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 ARRDC5A6NEK1 342 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 D6RAR5 112 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 HYAL3O43820 417 aaPredicted RBP15.95■□□□□ 0.14
HDDC3-206ENST00000561036 HS6ST1O60243 411 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 STX11O75558 287 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 CDC123O75794 336 aaPredicted RBP15.95■□□□□ 0.14
HDDC3-206ENST00000561036 ONECUT2O95948 504 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 THBS1P07996 1170 aa15.95■□□□□ 0.14
HDDC3-206ENST00000561036 UBTFL6P0CB48 400 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms