RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PRICKLE4Q2TBC4 344 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 BEX5Q5H9J7 111 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 DESI1Q6ICB0 168 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 CYS1Q717R9 158 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 PHC2Q8IXK0 858 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 RDH11Q8TC12 318 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 TMEM158Q8WZ71 300 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 CDKL2Q92772 493 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 SFXN2Q96NB2 322 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 ATOH8Q96SQ7 321 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 CPNE1Q99829 537 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 ALG9Q9H6U8 611 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 TXNDC16Q9P2K2 825 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 PPP2R2CQ9Y2T4 447 aa16.75■□□□□ 0.27
TPM1-226ENST00000560959 OR6C70A6NIJ9 312 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 KERAO60938 352 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 TNFRSF21O75509 655 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 ATP1B1P05026 303 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 PPP3CBP16298 524 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 TBXA2RP21731 343 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 PPICP45877 212 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 EEFSECP57772 596 aaKnown RBP16.74■□□□□ 0.27
TPM1-226ENST00000560959 OCRLQ01968 901 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 MGAT2Q10469 447 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 FASTKD3Q14CZ7 662 aaKnown RBP16.74■□□□□ 0.27
TPM1-226ENST00000560959 ETFDHQ16134 617 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 TEX9Q8N6V9 391 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 ZNF611Q8N823 705 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 WDR20Q8TBZ3 569 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 EXT2Q93063 718 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 ZNF845Q96IR2 970 aaPredicted RBP16.74■□□□□ 0.27
TPM1-226ENST00000560959 RBBP8Q99708 897 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 ITPAQ9BY32 194 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 OPN3Q9H1Y3 402 aaPredicted RBP16.74■□□□□ 0.27
TPM1-226ENST00000560959 NMRAL1Q9HBL8 299 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 PRODH2Q9UF12 536 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 ADAM29Q9UKF5 820 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 WIF1Q9Y5W5 379 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 CUBNO60494 3623 aa16.74■□□□□ 0.27
TPM1-226ENST00000560959 CCDC189A1A4V9 331 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 TP73O15350 636 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 KLF4O43474 513 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 TLX2O43763 284 aaPredicted RBP16.73■□□□□ 0.27
TPM1-226ENST00000560959 SEC31AO94979 1220 aaKnown RBP16.73■□□□□ 0.27
TPM1-226ENST00000560959 CNTFP26441 200 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 KCNJ5P48544 419 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 NR1H2P55055 460 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 ATP5J2P56134 94 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 C22orf34Q6ZV56 151 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 ZNF550Q7Z398 422 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 GAS2L3Q86XJ1 694 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
TPM1-226ENST00000560959 HIPK1Q86Z02 1210 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 L3MBTL4Q8NA19 623 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 TRPC4APQ8TEL6 797 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 COL21A1Q96P44 957 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 SERPINI1Q99574 410 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 PIGQQ9BRB3 760 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 RNF122Q9H9V4 155 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 FBXL2Q9UKC9 423 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 ANGPTL3Q9Y5C1 460 aa16.73■□□□□ 0.27
TPM1-226ENST00000560959 EXPH5Q8NEV8 1989 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 GOLGA6L10A6NI86 522 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 SYCE1LA8MT33 242 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 SUPT3HB4E1H0 165 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 LINC01387J3KSC0 135 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 UBXN8O00124 270 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 SUPT3HO75486 399 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 GBAP04062 536 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 MTHFD2P13995 350 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 GP5P40197 560 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 PSPHP78330 225 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 NNATQ16517 81 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 CPSF6Q16630 551 aaKnown RBP eCLIP16.72■□□□□ 0.27
TPM1-226ENST00000560959 ZNF610Q8N9Z0 462 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 RNF138Q8WVD3 245 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 SLC35A4Q96G79 324 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 ZC3HAV1LQ96H79 300 aaKnown RBP16.72■□□□□ 0.27
TPM1-226ENST00000560959 AHSPQ9NZD4 102 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 MAT2BQ9NZL9 334 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 HEY2Q9UBP5 337 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 BCAP29Q9UHQ4 241 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 DKKL1Q9UK85 242 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 CES1P1Q9UKY3 287 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 ACOT9Q9Y305 439 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 ZNF175Q9Y473 711 aa16.72■□□□□ 0.27
TPM1-226ENST00000560959 SONP18583 2426 aaKnown RBP16.72■□□□□ 0.27
TPM1-226ENST00000560959 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 CXorf49A8MYA2 514 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 GUCY1B2O75343 617 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 PIAS1O75925 651 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 DPP4P27487 766 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 DSCR4P56555 118 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 B3GALT5-AS1P59052 145 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 GUSBP1Q15486 140 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 C10orf62Q5T681 223 aaPredicted RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 SLC48A1Q6P1K1 146 aa16.71■□□□□ 0.27
TPM1-226ENST00000560959 METTL2BQ6P1Q9 378 aaKnown RBP16.71■□□□□ 0.27
TPM1-226ENST00000560959 FAM111BQ6SJ93 734 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms