RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 OR2A5Q96R48 311 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 OR1F2PQ96R84 312 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ACTL8Q9H568 366 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 SMURF2Q9HAU4 748 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF71Q9NQZ8 489 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PLA2G3Q9NZ20 509 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 CARD8Q9Y2G2 431 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 MAGED1Q9Y5V3 778 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PLXNA3P51805 1871 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 INTS1Q8N201 2190 aaKnown RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 IGHV5-10-1A0A0J9YXX1 117 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 SRRM3A6NNA2 597 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 G3V2T6 193 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PEX19P40855 299 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 GTF2A1P52655 376 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 UGT2B15P54855 530 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 MERTKQ12866 999 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 RGNQ15493 299 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 NEDD8Q15843 81 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PDZK1Q5T2W1 519 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 WLSQ5T9L3 541 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ERICH5Q6P6B1 374 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 C6orf15Q6UXA7 325 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 SHISA5Q8N114 240 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ZSCAN1Q8NBB4 408 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 SIMC1Q8NDZ2 872 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 OR52E4Q8NGH9 312 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 WDR20Q8TBZ3 569 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 CHTF18Q8WVB6 975 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 SLC38A4Q969I6 547 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 THOC3Q96J01 351 aaKnown RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF570Q96NI8 536 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 DACH2Q96NX9 599 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 TBX5Q99593 518 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ITPAQ9BY32 194 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PCED1AQ9H1Q7 454 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 MARCH7Q9H992 704 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PPP4R1LQ9P1A2 415 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PRODH2Q9UF12 536 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 DKKL1Q9UK85 242 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 PCDHA9Q9Y5H5 950 aa5.1□□□□□ -1.59
VPS13C-209ENST00000560637 ANKRD11Q6UB99 2663 aaPredicted RBP5.1□□□□□ -1.59
VPS13C-209ENST00000560637 A0A096LPI6 279 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 A0A1W2PPV9 198 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 GXYLT2A0PJZ3 443 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 LILRA5A6NI73 299 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 TNFSF14O43557 240 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 INMTO95050 263 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 HBQ1P09105 142 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ZGLP1P0C6A0 271 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ADSLP30566 484 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 GCKP35557 465 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 EIF1AXP47813 144 aaKnown RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FASLGP48023 281 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ACADVLP49748 655 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 CLCN2P51788 898 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 RAB38P57729 211 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 E2F1Q01094 437 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FZD5Q13467 585 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ATP1A1-AS1Q5TC04 95 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 RTL4Q6ZR62 310 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 RANBP3LQ86VV4 465 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ZNF248Q8NDW4 579 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ABHD11Q8NFV4 315 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 OR4N2Q8NGD1 307 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FAM81AQ8TBF8 368 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 UBTD2Q8WUN7 234 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 HSPBAP1Q96EW2 488 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 AMDHD1Q96NU7 426 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 CD180Q99467 661 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 PKP2Q99959 881 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 DGCR6LQ9BY27 220 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 OR10A5Q9H207 317 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 IKZF5Q9H5V7 419 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 S100A14Q9HCY8 104 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 MYNNQ9NPC7 610 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 WASH6PQ9NQA3 447 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 THSD1Q9NS62 852 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FAM53CQ9NYF3 392 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 STMN3Q9NZ72 180 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 NKX1-2Q9UD57 310 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 SCOCQ9UIL1 159 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 GMPPBQ9Y5P6 360 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 MRPS18BQ9Y676 258 aaKnown RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 PATJQ8NI35 1801 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ABCA4P78363 2273 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 IGKV1-8A0A0C4DH67 115 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 CXorf51AA0A1B0GTR3 108 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 OR2A25A4D2G3 310 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FAM166BA8MTA8 275 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FOXE1O00358 373 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 STX11O75558 287 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 SEMA3DO95025 777 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 SCELO95171 688 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 P04436 131 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 FCGR1AP12314 374 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 PAICSP22234 425 aaKnown RBP5.09□□□□□ -1.59
VPS13C-209ENST00000560637 BSGP35613 385 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 NUDT6P53370 316 aa5.09□□□□□ -1.59
VPS13C-209ENST00000560637 ESRRGP62508 458 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms