RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 MBD3L4A6NDZ8 208 aaPredicted RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 MBD3L3A6NE82 208 aaPredicted RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 MBD3L5A6NJ08 208 aaPredicted RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 SYT5O00445 386 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 DVL2O14641 736 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 ACOX3O15254 700 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 DLX3O60479 287 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 ICOSLGO75144 302 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 GLRA3O75311 464 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 NME6O75414 186 aaPredicted RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 SUPT7LO94864 414 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 SHBGP04278 402 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 GSTA1P08263 222 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 IL3P08700 152 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 NAGLUP54802 743 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 TRA2BP62995 288 aaKnown RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 RASA2Q15283 850 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 NUP54Q7Z3B4 507 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 YRDCQ86U90 279 aaKnown RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 SLC22A9Q8IVM8 553 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 PM20D2Q8IYS1 436 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 CCDC63Q8NA47 563 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 OR1J4Q8NGS1 313 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 MBD3L2Q8NHZ7 208 aaPredicted RBP16.3■□□□□ 0.2
RPL28-210ENST00000560583 ZNF675Q8TD23 568 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 FAIM2Q9BWQ8 316 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 LIME1Q9H400 295 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 VPS29Q9UBQ0 182 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 MCM8Q9UJA3 840 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 UTS2RQ9UKP6 389 aa16.3■□□□□ 0.2
RPL28-210ENST00000560583 ZFHX3Q15911 3703 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 PRAMEF25A6NGN4 478 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 FRG2CA6NGY1 282 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 CD8B2A6NJW9 211 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 ESPNB1AK53 854 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 B4DXG7 233 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 TO15178 435 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 HSD3B1P14060 373 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 ATP5F1P24539 256 aaPredicted RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 HSD3B2P26439 372 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 KIR2DL3P43628 341 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 PPICP45877 212 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 IST1P53990 364 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 VSNL1P62760 191 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 TOMM20Q15388 145 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 FLYWCH1Q4VC44 716 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 SLC30A6Q6NXT4 461 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 GPRIN3Q6ZVF9 776 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 WDSUB1Q8N9V3 476 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 OR9A2Q8NGT5 310 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 EPS8L3Q8TE67 593 aaKnown RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 RNASE6Q93091 150 aaKnown RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 C11orf24Q96F05 449 aaPredicted RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 OR2B2Q9GZK3 357 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 SERHLQ9NQF3 203 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 KLRF1Q9NZS2 232 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 ZNF629Q9UEG4 869 aaPredicted RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.29■□□□□ 0.2
RPL28-210ENST00000560583 MAPRE3Q9UPY8 281 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 DLGAP4Q9Y2H0 992 aa16.29■□□□□ 0.2
RPL28-210ENST00000560583 GPR55Q9Y2T6 319 aaPredicted RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 V9GYY5 206 aaPredicted RBP16.29■□□□□ 0.2
RPL28-210ENST00000560583 MED12LQ86YW9 2145 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 TLDC2A0PJX2 215 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 PCDH7O60245 1069 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 CDH16O75309 829 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 KRT6AP02538 564 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 KRT6BP04259 564 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 CD1EP15812 388 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 DRD5P21918 477 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 KRT6CP48668 564 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 CORO7P57737 925 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 HMGCS1Q01581 520 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 SNTA1Q13424 505 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 NPSR1Q6W5P4 371 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 C9orf106Q8NAJ2 232 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 MZB1Q8WU39 189 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 RNF138Q8WVD3 245 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 KAT2AQ92830 837 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 ABTB1Q969K4 478 aaPredicted RBP16.28■□□□□ 0.2
RPL28-210ENST00000560583 TMBIM1Q969X1 311 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 EXOSC8Q96B26 276 aaKnown RBP16.28■□□□□ 0.2
RPL28-210ENST00000560583 APIPQ96GX9 242 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 KCNA7Q96RP8 456 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 TRIB1Q96RU8 372 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 POLDIP3Q9BY77 421 aaKnown RBP16.28■□□□□ 0.2
RPL28-210ENST00000560583 RASSF1Q9NS23 344 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 NMRK1Q9NWW6 199 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 PRODH2Q9UF12 536 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 CBLCQ9ULV8 474 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 ZNF780BQ9Y6R6 833 aa16.28■□□□□ 0.2
RPL28-210ENST00000560583 MPDZO75970 2070 aa16.27■□□□□ 0.2
RPL28-210ENST00000560583 A0A1W2PPM1 405 aa16.27■□□□□ 0.2
RPL28-210ENST00000560583 COPEO14579 308 aa16.27■□□□□ 0.2
RPL28-210ENST00000560583 IL2RAP01589 272 aa16.27■□□□□ 0.2
RPL28-210ENST00000560583 CT45A8P0DMV1 189 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms