RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 TMPRSS11DO60235 418 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 EEDO75530 441 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 F12P00748 615 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 CD1DP15813 335 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 TBXA2RP21731 343 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 TCEA1P23193 301 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 EEFSECP57772 596 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 CAPRIN1Q14444 709 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 OR4D1Q15615 310 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 DESI1Q6ICB0 168 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 MRM1Q6IN84 353 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 NUDT13Q86X67 352 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 UBQLNLQ8IYU4 475 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 WDSUB1Q8N9V3 476 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 ANP32BQ92688 251 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 LCORQ96JN0 433 aaPredicted RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 REG4Q9BYZ8 158 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 PSD3Q9NYI0 1048 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 EHD3Q9NZN3 535 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 PROCRQ9UNN8 238 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 ANGPTL3Q9Y5C1 460 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 PCDHGA11Q9Y5H2 935 aa16.1■□□□□ 0.17
TSPAN3-208ENST00000560514 A0A087X1B8 175 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 EFCAB8A8MWE9 144 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 K7EPI3 171 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 HS3ST1O14792 307 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 PHF1O43189 567 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 EMC8O43402 210 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 CD5LO43866 347 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 SOX30O94993 753 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 PPP3CBP16298 524 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 LOXP28300 417 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 IDUAP35475 653 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 GMPRP36959 345 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 PTGDSP41222 190 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 KIR2DL2P43627 348 aaPredicted RBP16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 XKP51811 444 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 NEK2P51955 445 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 RPS4XP62701 263 aaKnown RBP16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 OCRLQ01968 901 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 PDIA2Q13087 525 aaKnown RBP16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 BCL2A1Q16548 175 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 EXOC3L2Q2M3D2 409 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 SH2D5Q6ZV89 423 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 ANKMY2Q8IV38 441 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 ZNF611Q8N823 705 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 FBXO36Q8NEA4 188 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 ADCY4Q8NFM4 1077 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 IGFBPL1Q8WX77 278 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 BRINP2Q9C0B6 783 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 CAB39LQ9H9S4 337 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 TXNDC16Q9P2K2 825 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 LAMP3Q9UQV4 416 aa16.09■□□□□ 0.17
TSPAN3-208ENST00000560514 A0A1W2PS29 197 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 SUPT3HB4E1H0 165 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 PGRMC2O15173 223 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 PHGDHO43175 533 aaKnown RBP16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 UGT2B11O75310 529 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 SUPT3HO75486 399 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 CD8BP10966 210 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 PEPDP12955 493 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 STMN1P16949 149 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 BSGP35613 385 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 MILR1Q7Z6M3 343 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 GBP7Q8N8V2 638 aaPredicted RBP16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 ZNF610Q8N9Z0 462 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 STAG3L4Q8TBR4 150 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 MCMBPQ9BTE3 642 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 ITPAQ9BY32 194 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 FANCFQ9NPI8 374 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 NUDT4Q9NZJ9 180 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 HEY2Q9UBP5 337 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 FBXL2Q9UKC9 423 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 DTX4Q9Y2E6 619 aa16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 MRPS18CQ9Y3D5 142 aaKnown RBP16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 ANK3Q12955 4377 aaKnown RBP16.08■□□□□ 0.16
TSPAN3-208ENST00000560514 CR1P17927 2039 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 CUBNO60494 3623 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 FAM187AA6NFU0 413 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 EIF3HO15372 352 aaKnown RBP eCLIP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 GBAP04062 536 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 ALDOAP04075 364 aaKnown RBP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 CPMP14384 443 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 PORP16435 677 aaPredicted RBP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 DPP4P27487 766 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 HMGCS1Q01581 520 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 CUL3Q13618 768 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 FIG4Q92562 907 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 GTPBP3Q969Y2 492 aaKnown RBP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 ZBED6CLQ96FA7 236 aaPredicted RBP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 PLPPR2Q96GM1 343 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 PINK1Q9BXM7 581 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 ZNF717Q9BY31 904 aaPredicted RBP16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 TSC22D4Q9Y3Q8 395 aa16.07■□□□□ 0.16
TSPAN3-208ENST00000560514 FRG2CA6NGY1 282 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 GOLGA6L10A6NI86 522 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 A8MV72 311 aaPredicted RBP16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 KLF4O43474 513 aa16.06■□□□□ 0.16
TSPAN3-208ENST00000560514 REM1O75628 298 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms