RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 C16orf58Q96GQ5 468 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM19Q96HH6 336 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 PYURFQ96I23 114 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 FBXL20Q96IG2 436 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TRNT1Q96Q11 434 aaKnown RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 ULBP3Q9BZM4 244 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 VN1R1Q9GZP7 353 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 OR10A5Q9H207 317 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CTSFQ9UBX1 484 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 NKX1-2Q9UD57 310 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 PRODH2Q9UF12 536 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 C19orf25Q9UFG5 118 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 HEMK1Q9Y5R4 338 aaPredicted RBP8.03□□□□□ -1.12
TRAF3-209ENST00000560463 CLCA3PQ9Y6N3 262 aa8.03□□□□□ -1.12
TRAF3-209ENST00000560463 PTPRZ1P23471 2315 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 MYOCOSA0A1B0GUC4 107 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 OR6C76A6NM76 312 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 IDSB3KWA1 339 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 AGRPO00253 132 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC28A2O43868 658 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ALOX12BO75342 701 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PRKD3O94806 890 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 NKX2-2O95096 273 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PGM3O95394 542 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF682O95780 498 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 BAG2O95816 211 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 IGHEP01854 428 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 FTH1P19P0C7X4 201 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ACP2P11117 423 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF28P17035 718 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ITIH1P19827 911 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 FASP25445 335 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 EMDP50402 254 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ERFP50548 548 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 EMP2P54851 167 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 RPS26P62854 115 aaKnown RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 COL9A2Q14055 689 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SYPL1Q16563 259 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 MLIPQ5VWP3 458 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 DGAT2L6Q6ZPD8 337 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 LRRC74BQ6ZQY2 392 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 LAPTM4BQ86VI4 370 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 TMPRSS12Q86WS5 348 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC16A11Q8NCK7 471 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 CHDHQ8NE62 594 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PTPMT1Q8WUK0 201 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC9A6Q92581 669 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 MR1Q95460 341 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 TSLPQ969D9 159 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC47A1Q96FL8 570 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC35A4Q96G79 324 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SLC46A1Q96NT5 459 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SEPHS2Q99611 448 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 SPSB2Q99619 263 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 TREX2Q9BQ50 279 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 YIPF4Q9BSR8 244 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 LMF2Q9BU23 707 aaKnown RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 DOHHQ9BU89 302 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 CNPPD1Q9BV87 410 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 VCX3BQ9H321 246 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 TRIM45Q9H8W5 580 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ANKRA2Q9H9E1 313 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 FOLH1BQ9HBA9 442 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 EQTNQ9NQ60 294 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 POLE3Q9NRF9 147 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PNO1Q9NRX1 252 aaKnown RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PISDQ9UG56 409 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PADI1Q9ULC6 663 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 AURKCQ9UQB9 309 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 ERVK-19Q9WJR5 959 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 B3GALT1Q9Y5Z6 326 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 GPC6Q9Y625 555 aaPredicted RBP8.02□□□□□ -1.13
TRAF3-209ENST00000560463 FREM3P0C091 2139 aa8.02□□□□□ -1.13
TRAF3-209ENST00000560463 PRAMEF27A3QJZ7 478 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 OR2W5A6NFC9 320 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 M0QX08 132 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 TM4SF5O14894 197 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 CASQ2O14958 399 aaPredicted RBP8.01□□□□□ -1.13
TRAF3-209ENST00000560463 BRINP1O60477 761 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 STX11O75558 287 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 GCM2O75603 506 aaPredicted RBP8.01□□□□□ -1.13
TRAF3-209ENST00000560463 STK17BO94768 372 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 DLGAP3O95886 979 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 IGKV3-11P04433 115 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 RAB40ALP0C0E4 278 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 SSTR4P31391 388 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 SLC5A2P31639 672 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 ETV5P41161 510 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 MAGEA2P43356 314 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 PGDP52209 483 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 DCAF7P61962 342 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 PSPHP78330 225 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 POU6F2P78424 691 aaPredicted RBP8.01□□□□□ -1.13
TRAF3-209ENST00000560463 HPCAP84074 193 aa8.01□□□□□ -1.13
TRAF3-209ENST00000560463 ZNF155Q12901 538 aaPredicted RBP8.01□□□□□ -1.13
TRAF3-209ENST00000560463 MAPK11Q15759 364 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms