RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GSTM2P28161 218 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 ANKDD1AQ495B1 522 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 GPR26Q8NDV2 337 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 CCDC120Q96HB5 630 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 OR5B2Q96R09 309 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 DNMT3BQ9UBC3 853 aaKnown RBP12.79□□□□□ -0.36
TRAF3-208ENST00000560371 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
TRAF3-208ENST00000560371 CNOT1A5YKK6 2376 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SGK494L7N484 410 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 APOL3O95236 402 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ACTA2P62736 377 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ACTG2P63267 376 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CDKL4Q5MAI5 379 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 PARS2Q7L3T8 475 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ARHGAP12Q8IWW6 846 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SLC39A1Q9NY26 324 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CLEC4EQ9ULY5 219 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SCN2AQ99250 2005 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 AKAP6Q13023 2319 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 HIDE1A8MVS5 230 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ADAM12O43184 909 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 EXOC3L2Q2M3D2 409 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 DUS1LQ6P1R4 473 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 OR13C3Q8NGS6 347 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 NEIL3Q8TAT5 605 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 THAP6Q8TBB0 222 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 DPH2Q9BQC3 489 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 RBM24Q9BX46 236 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ATG5Q9H1Y0 275 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 KCNS2Q9ULS6 477 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 H3BML4 177 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 TUBA3EQ6PEY2 450 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 PPP1R3BQ86XI6 285 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 RHBDF1Q96CC6 855 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 DPAGT1Q9H3H5 408 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CWH43Q9H720 699 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SLC22A31A6NKX4 558 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 RPS3P23396 243 aaKnown RBP eCLIP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SLC6A11P48066 632 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 AFF3P51826 1226 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 VN1R2Q8NFZ6 395 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 OR2T4Q8NH00 348 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 OR8S1Q8NH09 359 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 NEDD4LQ96PU5 975 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 URM1Q9BTM9 101 aaKnown RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 PCTPQ9UKL6 214 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 SCN1AP35498 2009 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 A0A0G2JPF8 293 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 HNRNPCL3B7ZW38 293 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 MSL3P1P0C860 447 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 HNRNPCL4P0DMR1 293 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CERS1P27544 350 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 S100A2P29034 98 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 BLMHQ13867 455 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 EID2Q8N6I1 236 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CD3GP09693 182 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 ANXA3P12429 323 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 IST1P53990 364 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 CTXN1P60606 82 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 OR52E1Q8NGJ3 308 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 EDAQ92838 391 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 MAL2Q969L2 176 aa12.78□□□□□ -0.36
TRAF3-208ENST00000560371 N4BP2Q86UW6 1770 aaPredicted RBP12.78□□□□□ -0.36
TRAF3-208ENST00000560371 POU4F2Q12837 409 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 MFSD13AQ14CX5 517 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 NKAPLQ5M9Q1 402 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 TMEM201Q5SNT2 666 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 APIPQ96GX9 242 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 FAM46AQ96IP4 442 aaKnown RBP12.77□□□□□ -0.36
TRAF3-208ENST00000560371 FUZQ9BT04 418 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 CCDC86Q9H6F5 360 aaKnown RBP12.77□□□□□ -0.36
TRAF3-208ENST00000560371 CSNK1G1Q9HCP0 422 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 STARD5Q9NSY2 213 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 GSKIPQ9P0R6 139 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 RNF6Q9Y252 685 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 KCNIP3Q9Y2W7 256 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 DRGXA6NNA5 263 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 MCATQ8IVS2 390 aaKnown RBP12.77□□□□□ -0.36
TRAF3-208ENST00000560371 CLECL1Q8IZS7 167 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 STRA6Q9BX79 667 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 KATNBL1Q9H079 304 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 EHD1Q9H4M9 534 aa12.77□□□□□ -0.36
TRAF3-208ENST00000560371 LOC102723532A0A0G2JNH3 316 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 CCRL2O00421 344 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 RDH16O75452 317 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 XCR1P46094 333 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 S100A10P60903 97 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF33BQ06732 778 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF252P-AS1Q0IIN9 211 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 KCNAB2Q13303 367 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 OGFRL1Q5TC84 451 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-208ENST00000560371 LHFPL3Q86UP9 236 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 SPERTQ8NA61 448 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 NEIL2Q969S2 332 aa12.77□□□□□ -0.37
TRAF3-208ENST00000560371 NXPE3Q969Y0 559 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms