RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 OR5M9Q8NGP3 310 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 HGDQ93099 445 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TMBIM1Q969X1 311 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NTNG2Q96CW9 530 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 C3orf30Q96M34 536 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 VSTM2LQ96N03 204 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 AMDHD1Q96NU7 426 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TSSK3Q96PN8 268 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 NODALQ96S42 347 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC6A15Q9H2J7 730 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 GLIPR2Q9H4G4 154 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 PNPLA3Q9NST1 481 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 TAS2R7Q9NYW3 318 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 SPRR3Q9UBC9 169 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 PRODH2Q9UF12 536 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 BOKQ9UMX3 212 aaPredicted RBP10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 CFL2Q9Y281 166 aa10.68□□□□□ -0.7
RABGGTA-216ENST00000560243 PHF3Q92576 2039 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 A0A1B0GVC2 190 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ANKRD33BA6NCL7 494 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 PRSS44E7EML9 344 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 E9PLN8 166 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ACOX3O15254 700 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 CTIFO43310 598 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 PLOD3O60568 738 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 UGT2B11O75310 529 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 CHEK2O96017 543 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 NEFHP12036 1026 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 BCKDHAP12694 445 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 TRPC1P48995 793 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 TMED10P49755 219 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 PLCXD2Q0VAA5 305 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC10A1Q14973 349 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 XKR7Q5GH72 579 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 MTFR2Q6P444 385 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 RPTNQ6XPR3 784 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 IKBIPQ70UQ0 350 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF551Q7Z340 670 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 WDR53Q7Z5U6 358 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 NUDCD3Q8IVD9 361 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF808Q8N4W9 903 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 OR4N2Q8NGD1 307 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 NUDT8Q8WV74 236 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 CIDECQ96AQ7 238 aaPredicted RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ERP27Q96DN0 273 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 HSPBAP1Q96EW2 488 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 METTL2AQ96IZ6 378 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 GNRHR2Q96P88 292 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 BTBD9Q96Q07 612 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 CCT7Q99832 543 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 VKORC1Q9BQB6 163 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 FOLH1BQ9HBA9 442 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 EML4Q9HC35 981 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 SENP1Q9P0U3 644 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 WBP11Q9Y2W2 641 aaKnown RBP10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 APCP25054 2843 aa10.67□□□□□ -0.7
RABGGTA-216ENST00000560243 TRGV5A0A0B4J1U4 118 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 FRG2CA6NGY1 282 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 UPK1AO00322 258 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 AQP7O14520 342 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 TO15178 435 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 PEX11AO75192 247 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 ERN1O75460 977 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 SKAP2O75563 359 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 DHRS4L1P0CG22 281 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 NAGAP17050 411 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 EFNA1P20827 205 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 GDF1P27539 372 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 NTSP30990 170 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 PTGDSP41222 190 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 MAN2A2P49641 1150 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 DCAF7P61962 342 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 ART3Q13508 389 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 CHI3L2Q15782 390 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 GXYLT1Q4G148 440 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 PAOXQ6QHF9 649 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC44A2Q8IWA5 706 aaPredicted RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 SLC34A3Q8N130 599 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 ZNF597Q96LX8 424 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 C20orf27Q9GZN8 174 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 REEP4Q9H6H4 257 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 LDAHQ9H6V9 325 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 METTL7AQ9H8H3 244 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 GALNT9Q9HCQ5 603 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 RYDENQ9NUL5 291 aaKnown RBP10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 TACC2O95359 2948 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 FBN2P35556 2912 aa10.66□□□□□ -0.7
RABGGTA-216ENST00000560243 NUP214P35658 2090 aaPredicted RBP10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 A0A087WV62 115 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 C17orf51A8MQB3 221 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 PLOD2O00469 737 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 GNB5O14775 395 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 SUSD5O60279 629 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 TSPAN2O60636 221 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 ICOSLGO75144 302 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 REM1O75628 298 aa10.65□□□□□ -0.7
RABGGTA-216ENST00000560243 BCAS2O75934 225 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms