RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 HSPBAP1Q96EW2 488 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 GIMAP5Q96F15 307 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 SGCZQ96LD1 299 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 C3orf14Q9HBI5 128 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 SH2D2AQ9NP31 389 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 TIMMDC1Q9NPL8 285 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 ZIM2Q9NZV7 527 aa18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 COPG1Q9Y678 874 aaKnown RBP18.7■□□□□ 0.58
TSPAN3-207ENST00000559494 PRSS51A0A1B0GVH4 220 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 FRG2CA6NGY1 282 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 RNASET2O00584 256 aaKnown RBP18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ACOX3O15254 700 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 CFLARO15519 480 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 SLC22A3O75751 556 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ABCB1P08183 1280 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ABCD3P28288 659 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 NRG3P56975 720 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 PSG6Q00889 435 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ZNF155Q12901 538 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 NTRK2Q16620 822 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 DPY19L1Q2PZI1 675 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ANXA8L1Q5VT79 327 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 PAOXQ6QHF9 649 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 SLC44A2Q8IWA5 706 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 GOLM1Q8NBJ4 401 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 TMEM178AQ8NBL3 297 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 PSD4Q8NDX1 1056 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ZNF317Q96PQ6 595 aaPredicted RBP18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ZBTB18Q99592 522 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 DEPPQ9NTK1 212 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 ASF1BQ9NVP2 202 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 SNX8Q9Y5X2 465 aa18.69■□□□□ 0.58
TSPAN3-207ENST00000559494 RASAL1O95294 804 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 CCL3P10147 92 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 MAP3K8P41279 467 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 CCT3P49368 545 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 MRPL19P49406 292 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 FBXW4P57775 412 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 PMP22Q01453 160 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 ANKRD46Q86W74 232 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 SULF2Q8IWU5 870 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 MIER2Q8N344 545 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 GLB1L3Q8NCI6 653 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 OR10G3Q8NGC4 313 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 OR4N2Q8NGD1 307 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 OR5M3Q8NGP4 307 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 OR9I1Q8NGQ6 314 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 GRHL3Q8TE85 626 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 HOXB13Q92826 284 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 C16orf58Q96GQ5 468 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 BARD1Q99728 777 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 LMF2Q9BU23 707 aaKnown RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 EQTNQ9NQ60 294 aa18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 KLF13Q9Y2Y9 288 aaPredicted RBP18.68■□□□□ 0.58
TSPAN3-207ENST00000559494 A0A0G2JND7 137 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 CAPN14A8MX76 684 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 PEX1O43933 1283 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 CPSF4O95639 269 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 PGRP06401 933 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 NAGAP17050 411 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 SF3A3Q12874 501 aaKnown RBP eCLIP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 GAB1Q13480 694 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 INAQ16352 499 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 SLC22A10Q63ZE4 541 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 DESI1Q6ICB0 168 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 DND1Q8IYX4 353 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 SLC34A3Q8N130 599 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 FAM13CQ8NE31 585 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 VPS37AQ8NEZ2 397 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 PAQR8Q8TEZ7 354 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 OMA1Q96E52 524 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 SIKE1Q9BRV8 207 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 ZCCHC3Q9NUD5 404 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 FAM120CQ9NX05 1096 aaKnown RBP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 BTNL2Q9UIR0 455 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 CHCHD2Q9Y6H1 151 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 EXPH5Q8NEV8 1989 aa18.67■□□□□ 0.58
TSPAN3-207ENST00000559494 ZGRF1Q86YA3 2104 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 ASPDHA6ND91 283 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 G3V3Y1 287 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 PPM1BO75688 479 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 TROVE2P10155 538 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■□□□□ 9.2
TSPAN3-207ENST00000559494 CNR1P21554 472 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 GYS2P54840 703 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 GPR85P60893 370 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 PRR5P85299 388 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 IGFBP7Q16270 282 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 SZRD1Q7Z422 152 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 OR4A15Q8NGL6 344 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 TMBIM1Q969X1 311 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 RILPQ96NA2 401 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 MS4A4EQ96PG1 132 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 OR52E6Q96RD3 313 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 YIPF4Q9BSR8 244 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 TMEM120AQ9BXJ8 343 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 PROK2Q9HC23 129 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 NEUROD4Q9HD90 331 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 FAM53CQ9NYF3 392 aa18.66■□□□□ 0.58
TSPAN3-207ENST00000559494 CNOT11Q9UKZ1 510 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms