RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 RFXANKO14593 260 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 TO15178 435 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 ACOX3O15254 700 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CCDC22O60826 627 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 OR6B1O95007 311 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 FAM107AO95990 144 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CT45A8P0DMV1 189 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CT45A9P0DMV2 189 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 UQCRC2P22695 453 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 ADSLP30566 484 aaPredicted RBP20.02■□□□□ 0.8
SNX1-206ENST00000559389 CD96P40200 585 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 MAP3K8P41279 467 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 TNFSF10P50591 281 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 KLF10Q13118 480 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 TP53BP2Q13625 1128 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 MAPKAPK3Q16644 382 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CT45A2Q5DJT8 189 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 SLC2A7Q6PXP3 512 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 OPN5Q6U736 354 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 TAGAPQ8N103 731 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 TMEM156Q8N614 296 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CDRT4Q8N9R6 151 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 MDS2Q8NDY4 140 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 HSPBAP1Q96EW2 488 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 ITCHQ96J02 903 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 CCT8L2Q96SF2 557 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 GPATCH2Q9NW75 528 aa20.02■□□□□ 0.8
SNX1-206ENST00000559389 A0A1W2PP18 115 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 SLC22A2O15244 555 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 HMGN2P05204 90 aaKnown RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 FBXO45P0C2W1 286 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 CYB561P49447 251 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 PRIM2P49643 509 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 OC90Q02509 493 aaPredicted RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 LASP1Q14847 261 aaKnown RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 TLR1Q15399 786 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 OR1C1Q15619 314 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 ZNHIT3Q15649 155 aaPredicted RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 VPS26BQ4G0F5 336 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 ZCCHC12Q6PEW1 402 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 BHLHB9Q6PI77 547 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 Q6ZS92 163 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 WDR53Q7Z5U6 358 aaPredicted RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 ZNF227Q86WZ6 799 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 CLEC4FQ8N1N0 589 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 TSPEARQ8WU66 669 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 GTF2H4Q92759 462 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 SPACA9Q96E40 222 aaPredicted RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 BBC3Q96PG8 261 aaPredicted RBP20.01■□□□□ 0.79
SNX1-206ENST00000559389 SIGLEC12Q96PQ1 595 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 SLC35A5Q9BS91 424 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 LRFN1Q9P244 771 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 VPS4AQ9UN37 437 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 CAPN7Q9Y6W3 813 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 EXPH5Q8NEV8 1989 aa20.01■□□□□ 0.79
SNX1-206ENST00000559389 A8MVJ9 347 aa20■□□□□ 0.79
SNX1-206ENST00000559389 NEURL1O76050 574 aa20■□□□□ 0.79
SNX1-206ENST00000559389 ZCCHC18P0CG32 403 aa20■□□□□ 0.79
SNX1-206ENST00000559389 ACP2P11117 423 aa20■□□□□ 0.79
SNX1-206ENST00000559389 HOXB9P17482 250 aaPredicted RBP20■□□□□ 0.79
SNX1-206ENST00000559389 ABCD3P28288 659 aa20■□□□□ 0.79
SNX1-206ENST00000559389 PTPN6P29350 595 aa20■□□□□ 0.79
SNX1-206ENST00000559389 TRPC1P48995 793 aa20■□□□□ 0.79
SNX1-206ENST00000559389 NRG3P56975 720 aa20■□□□□ 0.79
SNX1-206ENST00000559389 PSPHP78330 225 aa20■□□□□ 0.79
SNX1-206ENST00000559389 ZNF791Q3KP31 576 aaPredicted RBP20■□□□□ 0.79
SNX1-206ENST00000559389 C6orf10Q5SRN2 563 aa20■□□□□ 0.79
SNX1-206ENST00000559389 SAXO2Q658L1 398 aa20■□□□□ 0.79
SNX1-206ENST00000559389 SLC6A19Q695T7 634 aa20■□□□□ 0.79
SNX1-206ENST00000559389 SLC44A2Q8IWA5 706 aaPredicted RBP20■□□□□ 0.79
SNX1-206ENST00000559389 DND1Q8IYX4 353 aaKnown RBP20■□□□□ 0.79
SNX1-206ENST00000559389 CYP4Z2PQ8N1L4 340 aa20■□□□□ 0.79
SNX1-206ENST00000559389 TRIML2Q8N7C3 387 aa20■□□□□ 0.79
SNX1-206ENST00000559389 CATSPER1Q8NEC5 780 aa20■□□□□ 0.79
SNX1-206ENST00000559389 Q9N2J8 555 aa20■□□□□ 0.79
SNX1-206ENST00000559389 SLC6A13Q9NSD5 602 aa20■□□□□ 0.79
SNX1-206ENST00000559389 HPF1Q9NWY4 346 aa20■□□□□ 0.79
SNX1-206ENST00000559389 ARMCX1Q9P291 453 aa20■□□□□ 0.79
SNX1-206ENST00000559389 ARL2BPQ9Y2Y0 163 aa20■□□□□ 0.79
SNX1-206ENST00000559389 NKX2-2O95096 273 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 SNRPB2P08579 225 aaKnown RBP19.99■□□□□ 0.79
SNX1-206ENST00000559389 KRT16P08779 473 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 TMED10P49755 219 aaKnown RBP19.99■□□□□ 0.79
SNX1-206ENST00000559389 PLCXD2Q0VAA5 305 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 GTDC1Q4AE62 458 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 NADK2Q4G0N4 442 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 PAGE3Q5JUK9 113 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 CDC73Q6P1J9 531 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 PRR22Q8IZ63 422 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 SLC34A3Q8N130 599 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 FBXO30Q8TB52 745 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 OMA1Q96E52 524 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 NEURL3Q96EH8 262 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 C16orf58Q96GQ5 468 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 SLC35G5Q96KT7 338 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 PHF12Q96QT6 1004 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 ACTRT3Q9BYD9 372 aa19.99■□□□□ 0.79
SNX1-206ENST00000559389 PAIP1Q9H074 479 aaKnown RBP19.99■□□□□ 0.79
SNX1-206ENST00000559389 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.99■□□□□ 0.79
SNX1-206ENST00000559389 MYLK2Q9H1R3 596 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms