RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 PHF21BQ96EK2 531 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 WDR34Q96EX3 536 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 CMTM7Q96FZ5 175 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 SENP5Q96HI0 755 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 SEC16BQ96JE7 1060 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 SMC6Q96SB8 1091 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 VKORC1Q9BQB6 163 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 FAM173AQ9BQD7 235 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 LRRC1Q9BTT6 524 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ERVK-6Q9BXR3 956 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 TTTY12Q9BZ98 90 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 UCK2Q9BZX2 261 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 LDAHQ9H6V9 325 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 RPF2Q9H7B2 306 aaKnown RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 TRIM45Q9H8W5 580 aaPredicted RBP6.76□□□□□ -1.33
SPG11-213ENST00000558988 IPPKQ9H8X2 491 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 DMRT3Q9NQL9 472 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 PNPLA3Q9NST1 481 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 SACM1LQ9NTJ5 587 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ERVK-19Q9WJR5 959 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 LIPGQ9Y5X9 500 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 EML6Q6ZMW3 1958 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 ZNF407Q9C0G0 2248 aa6.76□□□□□ -1.33
SPG11-213ENST00000558988 NCOA6Q14686 2063 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 MYO9AB2RTY4 2548 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 DNAJC13O75165 2243 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 IQANK1A0A1B0GTG1 560 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 POC1B-GALNT4F8VUJ3 575 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ADAM10O14672 748 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TMPRSS11DO60235 418 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ZNF354AO60765 605 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 NUDT3O95989 172 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 NR2F6P10588 404 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 MTHFD2P13995 350 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ALOX15P16050 662 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 ELAVL4P26378 380 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 SERPINB1P30740 379 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 PHBP35232 272 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 PTGER4P35408 488 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 STT3AP46977 705 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 SERPINB8P50452 374 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TNFRSF17Q02223 184 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TLE4Q04727 773 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 NAB1Q13506 487 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 GTF2H2Q13888 395 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TEX35Q5T0J7 233 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 DEPDC1Q5TB30 811 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 GTF2H2CQ6P1K8 395 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 OPN5Q6U736 354 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TEPPQ6URK8 271 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 RPS27LQ71UM5 84 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 SLC22A16Q86VW1 577 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 C9orf40Q8IXQ3 194 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 GPALPP1Q8IXQ4 340 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TMEM251Q8N6I4 163 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 PTGR2Q8N8N7 351 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 ZFP62Q8NB50 900 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 OR5L2Q8NGL0 311 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 SLC22A8Q8TCC7 542 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ZNF721Q8TF20 911 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 RND1Q92730 232 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 UCN3Q969E3 161 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 REPS1Q96D71 796 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 RBM18Q96H35 190 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 LURAP1Q96LR2 239 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 DMRTA2Q96SC8 542 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TP63Q9H3D4 680 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 NOL11Q9H8H0 719 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 WDR41Q9HAD4 459 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 SEMA4BQ9NPR2 832 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 TUBA8Q9NY65 449 aaPredicted RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 NINJ2Q9NZG7 142 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 MTRF1LQ9UGC7 380 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 PHF11Q9UIL8 331 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ACAD8Q9UKU7 415 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 PPIEQ9UNP9 301 aaKnown RBP6.75□□□□□ -1.33
SPG11-213ENST00000558988 RNF6Q9Y252 685 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 RNF11Q9Y3C5 154 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 ATG4BQ9Y4P1 393 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 IKBKGQ9Y6K9 419 aa6.75□□□□□ -1.33
SPG11-213ENST00000558988 TEX15Q9BXT5 2789 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 A0A1W2PR48 441 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 A0A1W2PS29 197 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 KLHL2O95198 593 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 AIFM1O95831 613 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 ALDOAP04075 364 aaKnown RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 INHBAP08476 426 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 FAM58BPP0C7Q3 252 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 ATF4P18848 351 aaPredicted RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 TSPAN8P19075 237 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 AGAP20933 346 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 CNR1P21554 472 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SSTR2P30874 369 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 CASP2P42575 452 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 TRPC1P48995 793 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 MAN2A2P49641 1150 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 CCNG1P51959 295 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 ALDH18A1P54886 795 aaKnown RBP6.74□□□□□ -1.33
SPG11-213ENST00000558988 NUP107P57740 925 aa6.74□□□□□ -1.33
SPG11-213ENST00000558988 SNTB1Q13884 538 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms